Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: Gm35161 ENSMUSG00000113121

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Description

predicted gene, 35161 [Source:MGI Symbol;Acc:MGI:5594320]

Location

Chromosome 13: 69,145,759-69,179,674 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000338580.1	Gm35161-203	633	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000338595.1	Gm35161-218	1487	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338596.1	Gm35161-219	1167	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000221765.2	Gm35161-201	941	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000338585.1	Gm35161-208	938	No protein	-	lncRNA		-
ENSMUST00000338586.1	Gm35161-209	925	No protein	-	lncRNA		-
ENSMUST00000338584.1	Gm35161-207	922	No protein	-	lncRNA		-
ENSMUST00000338589.1	Gm35161-212	912	No protein	-	lncRNA		-
ENSMUST00000338581.1	Gm35161-204	875	No protein	-	lncRNA		-
ENSMUST00000338587.1	Gm35161-210	873	No protein	-	lncRNA		-
ENSMUST00000338590.1	Gm35161-213	861	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000338582.1	Gm35161-205	777	No protein	-	lncRNA		-
ENSMUST00000338583.1	Gm35161-206	761	No protein	-	lncRNA		-
ENSMUST00000338588.1	Gm35161-211	754	No protein	-	lncRNA		-
ENSMUST00000338591.1	Gm35161-214	646	No protein	-	lncRNA		-
ENSMUST00000222786.2	Gm35161-202	623	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000338592.1	Gm35161-215	415	No protein	-	lncRNA		-
ENSMUST00000338594.1	Gm35161-217	361	No protein	-	lncRNA		-
ENSMUST00000338593.1	Gm35161-216	350	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data