Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm31497 ENSMUSG00000110813

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Description

predicted gene, 31497 [Source:MGI Symbol;Acc:MGI:5590656]

Location

Chromosome 9: 31,817,268-31,822,833 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000265849.1	Gm31497-202	1010	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265854.1	Gm31497-207	920	No protein	-	lncRNA		-
ENSMUST00000265855.1	Gm31497-208	794	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000265856.1	Gm31497-209	672	No protein	-	lncRNA		-
ENSMUST00000216981.2	Gm31497-201	638	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000265850.1	Gm31497-203	571	No protein	-	lncRNA		-
ENSMUST00000265852.1	Gm31497-205	534	No protein	-	lncRNA		-
ENSMUST00000265859.1	Gm31497-212	532	No protein	-	lncRNA		-
ENSMUST00000265857.1	Gm31497-210	467	No protein	-	lncRNA		-
ENSMUST00000265858.1	Gm31497-211	453	No protein	-	lncRNA		-
ENSMUST00000265851.1	Gm31497-204	450	No protein	-	lncRNA		-
ENSMUST00000265853.1	Gm31497-206	435	No protein	-	lncRNA		-
ENSMUST00000265860.1	Gm31497-213	366	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data