Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
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ID History
- Gene history

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Gene: Gm35986 ENSMUSG00000105837

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Description

predicted gene, 35986 [Source:MGI Symbol;Acc:MGI:5595145]

Location

Chromosome 3: 129,321,082-129,326,037 reverse strand.

GRCm39:CM000996.3

About this gene

This gene has 12 transcripts (splice variants) and 1 orthologue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000197370.7	Gm35986-201	948	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000241897.2	Gm35986-203	1646	No protein	-	lncRNA		-
ENSMUST00000364746.1	Gm35986-206	1287	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000242993.2	Gm35986-204	796	No protein	-	lncRNA		-
ENSMUST00000364749.1	Gm35986-209	786	No protein	-	lncRNA		-
ENSMUST00000364747.1	Gm35986-207	782	No protein	-	lncRNA		-
ENSMUST00000243809.2	Gm35986-205	666	No protein	-	lncRNA		-
ENSMUST00000200419.3	Gm35986-202	598	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000364750.1	Gm35986-210	503	No protein	-	lncRNA		-
ENSMUST00000364752.1	Gm35986-212	492	No protein	-	lncRNA		-
ENSMUST00000364751.1	Gm35986-211	472	No protein	-	lncRNA		-
ENSMUST00000364748.1	Gm35986-208	448	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data