Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Gm33847 ENSMUSG00000105299

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Description

predicted gene, 33847 [Source:MGI Symbol;Acc:MGI:5593006]

Gene Synonyms

Gm43639

Location

Chromosome 5: 11,688,495-11,730,830 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 16 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000272210.1	Gm33847-202	798	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000272217.1	Gm33847-209	1005	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000272215.1	Gm33847-207	870	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000199294.3	Gm33847-201	839	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000272216.1	Gm33847-208	829	No protein	-	lncRNA		-
ENSMUST00000272223.1	Gm33847-215	771	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000272213.1	Gm33847-205	767	No protein	-	lncRNA		-
ENSMUST00000272219.1	Gm33847-211	740	No protein	-	lncRNA		-
ENSMUST00000272224.1	Gm33847-216	716	No protein	-	lncRNA		-
ENSMUST00000272222.1	Gm33847-214	532	No protein	-	lncRNA		-
ENSMUST00000272221.1	Gm33847-213	519	No protein	-	lncRNA		-
ENSMUST00000272220.1	Gm33847-212	509	No protein	-	lncRNA		-
ENSMUST00000272212.1	Gm33847-204	463	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000272218.1	Gm33847-210	436	No protein	-	lncRNA		-
ENSMUST00000272214.1	Gm33847-206	425	No protein	-	lncRNA		-
ENSMUST00000272211.1	Gm33847-203	348	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data