Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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Pathway
Molecular interactions
Regulation
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ID History
- Gene history

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Gene: 4930519F24Rik ENSMUSG00000101584

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Description

RIKEN cDNA 4930519F24 gene [Source:MGI Symbol;Acc:MGI:1922047]

Location

Chromosome 9: 99,904,307-99,954,350 forward strand.

GRCm39:CM001002.3

About this gene

This gene has 15 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000365076.1	4930519F24Rik-203	681	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000365081.1	4930519F24Rik-208	832	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000365077.1	4930519F24Rik-204	779	No protein	-	lncRNA		-
ENSMUST00000365080.1	4930519F24Rik-207	758	No protein	-	lncRNA		-
ENSMUST00000185764.3	4930519F24Rik-201	676	No protein	-	lncRNA		TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000365082.1	4930519F24Rik-209	674	No protein	-	lncRNA		-
ENSMUST00000365087.1	4930519F24Rik-214	649	No protein	-	lncRNA		-
ENSMUST00000365079.1	4930519F24Rik-206	647	No protein	-	lncRNA		-
ENSMUST00000365088.1	4930519F24Rik-215	616	No protein	-	lncRNA		-
ENSMUST00000365084.1	4930519F24Rik-211	579	No protein	-	lncRNA		-
ENSMUST00000365083.1	4930519F24Rik-210	562	No protein	-	lncRNA		-
ENSMUST00000365086.1	4930519F24Rik-213	529	No protein	-	lncRNA		-
ENSMUST00000365078.1	4930519F24Rik-205	522	No protein	-	lncRNA		-
ENSMUST00000365085.1	4930519F24Rik-212	447	No protein	-	lncRNA		-
ENSMUST00000215896.2	4930519F24Rik-202	342	No protein	-	lncRNA		TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data