Gene: 1700108F19Rik ENSMUSG00000101009

Description

RIKEN cDNA 1700108F19 gene [Source:MGI Symbol;Acc:MGI:1920814]

Location

Chromosome 14: 76,813,186-76,924,754 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 79 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000185809.2	1700108F19Rik-202	2252	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000281149.1	1700108F19Rik-209	485	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281186.1	1700108F19Rik-246	1619	No protein	-	lncRNA	-
ENSMUST00000190818.8	1700108F19Rik-205	1449	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000281204.1	1700108F19Rik-264	1291	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281180.1	1700108F19Rik-240	1261	No protein	-	lncRNA	-
ENSMUST00000281182.1	1700108F19Rik-242	1248	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281197.1	1700108F19Rik-257	1245	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281202.1	1700108F19Rik-262	1203	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281212.1	1700108F19Rik-272	1187	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281216.1	1700108F19Rik-276	1134	No protein	-	lncRNA	-
ENSMUST00000281198.1	1700108F19Rik-258	1115	No protein	-	lncRNA	-
ENSMUST00000191384.3	1700108F19Rik-207	1111	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000281195.1	1700108F19Rik-255	1106	No protein	-	lncRNA	-
ENSMUST00000281213.1	1700108F19Rik-273	1097	No protein	-	lncRNA	-
ENSMUST00000281191.1	1700108F19Rik-251	1083	No protein	-	lncRNA	-
ENSMUST00000281190.1	1700108F19Rik-250	1080	No protein	-	lncRNA	-
ENSMUST00000281196.1	1700108F19Rik-256	1045	No protein	-	lncRNA	-
ENSMUST00000281199.1	1700108F19Rik-259	1034	No protein	-	lncRNA	-
ENSMUST00000281214.1	1700108F19Rik-274	1021	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281200.1	1700108F19Rik-260	952	No protein	-	lncRNA	-
ENSMUST00000281167.1	1700108F19Rik-227	929	No protein	-	lncRNA	-
ENSMUST00000191266.8	1700108F19Rik-206	921	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000281159.1	1700108F19Rik-219	913	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281163.1	1700108F19Rik-223	900	No protein	-	lncRNA	-
ENSMUST00000281184.1	1700108F19Rik-244	888	No protein	-	lncRNA	-
ENSMUST00000281185.1	1700108F19Rik-245	868	No protein	-	lncRNA	-
ENSMUST00000281193.1	1700108F19Rik-253	842	No protein	-	lncRNA	-
ENSMUST00000281156.1	1700108F19Rik-216	818	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281171.1	1700108F19Rik-231	809	No protein	-	lncRNA	-
ENSMUST00000188798.8	1700108F19Rik-203	778	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000281189.1	1700108F19Rik-249	776	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281161.1	1700108F19Rik-221	766	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281217.1	1700108F19Rik-277	756	No protein	-	lncRNA	-
ENSMUST00000281155.1	1700108F19Rik-215	752	No protein	-	lncRNA	-
ENSMUST00000281153.1	1700108F19Rik-213	721	No protein	-	lncRNA	-
ENSMUST00000281169.1	1700108F19Rik-229	712	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000185213.8	1700108F19Rik-201	712	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000281188.1	1700108F19Rik-248	710	No protein	-	lncRNA	-
ENSMUST00000281194.1	1700108F19Rik-254	701	No protein	-	lncRNA	-
ENSMUST00000281183.1	1700108F19Rik-243	694	No protein	-	lncRNA	-
ENSMUST00000281173.1	1700108F19Rik-233	690	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281206.1	1700108F19Rik-266	690	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281164.1	1700108F19Rik-224	688	No protein	-	lncRNA	-
ENSMUST00000281157.1	1700108F19Rik-217	687	No protein	-	lncRNA	-
ENSMUST00000281209.1	1700108F19Rik-269	686	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281165.1	1700108F19Rik-225	672	No protein	-	lncRNA	-
ENSMUST00000281187.1	1700108F19Rik-247	671	No protein	-	lncRNA	-
ENSMUST00000281207.1	1700108F19Rik-267	670	No protein	-	lncRNA	-
ENSMUST00000281175.1	1700108F19Rik-235	665	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281208.1	1700108F19Rik-268	661	No protein	-	lncRNA	-
ENSMUST00000191447.2	1700108F19Rik-208	660	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000281192.1	1700108F19Rik-252	648	No protein	-	lncRNA	-
ENSMUST00000281158.1	1700108F19Rik-218	636	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281210.1	1700108F19Rik-270	633	No protein	-	lncRNA	-
ENSMUST00000281160.1	1700108F19Rik-220	631	No protein	-	lncRNA	-
ENSMUST00000281215.1	1700108F19Rik-275	628	No protein	-	lncRNA	-
ENSMUST00000281168.1	1700108F19Rik-228	606	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281201.1	1700108F19Rik-261	587	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281205.1	1700108F19Rik-265	586	No protein	-	lncRNA	-
ENSMUST00000281150.1	1700108F19Rik-210	572	No protein	-	lncRNA	-
ENSMUST00000281162.1	1700108F19Rik-222	559	No protein	-	lncRNA	-
ENSMUST00000281154.1	1700108F19Rik-214	551	No protein	-	lncRNA	-
ENSMUST00000281181.1	1700108F19Rik-241	546	No protein	-	lncRNA	-
ENSMUST00000281166.1	1700108F19Rik-226	514	No protein	-	lncRNA	-
ENSMUST00000281219.1	1700108F19Rik-279	507	No protein	-	lncRNA	-
ENSMUST00000281151.1	1700108F19Rik-211	503	No protein	-	lncRNA	-
ENSMUST00000189375.2	1700108F19Rik-204	494	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000281211.1	1700108F19Rik-271	487	No protein	-	lncRNA	-
ENSMUST00000281179.1	1700108F19Rik-239	464	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281170.1	1700108F19Rik-230	455	No protein	-	lncRNA	-
ENSMUST00000281177.1	1700108F19Rik-237	445	No protein	-	lncRNA	-
ENSMUST00000281174.1	1700108F19Rik-234	427	No protein	-	lncRNA	-
ENSMUST00000281176.1	1700108F19Rik-236	421	No protein	-	lncRNA	-
ENSMUST00000281178.1	1700108F19Rik-238	388	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281203.1	1700108F19Rik-263	387	No protein	-	lncRNA	-
ENSMUST00000281152.1	1700108F19Rik-212	378	No protein	-	lncRNA	-
ENSMUST00000281172.1	1700108F19Rik-232	243	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000281218.1	1700108F19Rik-278	239	No protein	-	lncRNA	-