Gene: 1700030F04Rik ENSMUSG00000099869

Description

RIKEN cDNA 1700030F04 gene [Source:MGI Symbol;Acc:MGI:1919513]

Location

Chromosome 6: 117,546,983-117,733,440 reverse strand.

GRCm39:CM000999.3

About this gene

This gene has 65 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000260720.1	1700030F04Rik-211	2878	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000245465.2	1700030F04Rik-208	3003	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000205216.4	1700030F04Rik-204	2988	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000260764.1	1700030F04Rik-254	2671	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260995.1	1700030F04Rik-258	2595	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260998.1	1700030F04Rik-261	2317	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260766.1	1700030F04Rik-256	1537	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000261001.1	1700030F04Rik-264	1292	No protein	-	lncRNA	-
ENSMUST00000260996.1	1700030F04Rik-259	1245	No protein	-	lncRNA	-
ENSMUST00000260997.1	1700030F04Rik-260	1216	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260994.1	1700030F04Rik-257	1149	No protein	-	lncRNA	-
ENSMUST00000260721.1	1700030F04Rik-212	924	No protein	-	lncRNA	-
ENSMUST00000260736.1	1700030F04Rik-227	898	No protein	-	lncRNA	-
ENSMUST00000260726.1	1700030F04Rik-217	876	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260730.1	1700030F04Rik-221	855	No protein	-	lncRNA	-
ENSMUST00000260740.1	1700030F04Rik-231	832	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000187642.3	1700030F04Rik-201	815	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000260725.1	1700030F04Rik-216	814	No protein	-	lncRNA	-
ENSMUST00000260758.1	1700030F04Rik-248	800	No protein	-	lncRNA	-
ENSMUST00000260722.1	1700030F04Rik-213	787	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260734.1	1700030F04Rik-225	765	No protein	-	lncRNA	-
ENSMUST00000260729.1	1700030F04Rik-220	764	No protein	-	lncRNA	-
ENSMUST00000244728.2	1700030F04Rik-207	753	No protein	-	lncRNA	-
ENSMUST00000260728.1	1700030F04Rik-219	750	No protein	-	lncRNA	-
ENSMUST00000260727.1	1700030F04Rik-218	740	No protein	-	lncRNA	-
ENSMUST00000260735.1	1700030F04Rik-226	719	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000246524.2	1700030F04Rik-210	713	No protein	-	lncRNA	-
ENSMUST00000260733.1	1700030F04Rik-224	711	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260762.1	1700030F04Rik-252	711	No protein	-	lncRNA	-
ENSMUST00000260724.1	1700030F04Rik-215	703	No protein	-	lncRNA	-
ENSMUST00000260723.1	1700030F04Rik-214	702	No protein	-	lncRNA	-
ENSMUST00000260744.1	1700030F04Rik-235	688	No protein	-	lncRNA	-
ENSMUST00000240783.1	1700030F04Rik-205	678	No protein	-	lncRNA	-
ENSMUST00000188781.8	1700030F04Rik-202	677	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000260748.1	1700030F04Rik-239	674	No protein	-	lncRNA	-
ENSMUST00000260738.1	1700030F04Rik-229	648	No protein	-	lncRNA	-
ENSMUST00000260741.1	1700030F04Rik-232	641	No protein	-	lncRNA	-
ENSMUST00000260753.1	1700030F04Rik-244	630	No protein	-	lncRNA	-
ENSMUST00000260739.1	1700030F04Rik-230	624	No protein	-	lncRNA	-
ENSMUST00000241033.2	1700030F04Rik-206	596	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260750.1	1700030F04Rik-241	586	No protein	-	lncRNA	-
ENSMUST00000261000.1	1700030F04Rik-263	586	No protein	-	lncRNA	-
ENSMUST00000261002.1	1700030F04Rik-265	577	No protein	-	lncRNA	-
ENSMUST00000260746.1	1700030F04Rik-237	575	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000260747.1	1700030F04Rik-238	571	No protein	-	lncRNA	-
ENSMUST00000260742.1	1700030F04Rik-233	545	No protein	-	lncRNA	-
ENSMUST00000260999.1	1700030F04Rik-262	545	No protein	-	lncRNA	-
ENSMUST00000260751.1	1700030F04Rik-242	542	No protein	-	lncRNA	-
ENSMUST00000260745.1	1700030F04Rik-236	523	No protein	-	lncRNA	-
ENSMUST00000246238.1	1700030F04Rik-209	523	No protein	-	lncRNA	-
ENSMUST00000260731.1	1700030F04Rik-222	516	No protein	-	lncRNA	-
ENSMUST00000260732.1	1700030F04Rik-223	510	No protein	-	lncRNA	-
ENSMUST00000190546.7	1700030F04Rik-203	485	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000260737.1	1700030F04Rik-228	478	No protein	-	lncRNA	-
ENSMUST00000260763.1	1700030F04Rik-253	470	No protein	-	lncRNA	-
ENSMUST00000260756.1	1700030F04Rik-246	455	No protein	-	lncRNA	-
ENSMUST00000260743.1	1700030F04Rik-234	434	No protein	-	lncRNA	-
ENSMUST00000260752.1	1700030F04Rik-243	423	No protein	-	lncRNA	-
ENSMUST00000260760.1	1700030F04Rik-250	407	No protein	-	lncRNA	-
ENSMUST00000260755.1	1700030F04Rik-245	394	No protein	-	lncRNA	-
ENSMUST00000260765.1	1700030F04Rik-255	387	No protein	-	lncRNA	-
ENSMUST00000260757.1	1700030F04Rik-247	364	No protein	-	lncRNA	-
ENSMUST00000260759.1	1700030F04Rik-249	347	No protein	-	lncRNA	-
ENSMUST00000260761.1	1700030F04Rik-251	341	No protein	-	lncRNA	-
ENSMUST00000260749.1	1700030F04Rik-240	281	No protein	-	lncRNA	-