Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
- Gene tree
- Gene gain/loss tree
- Orthologues
- Paralogues
- Strains
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
Gene expression
Pathway
Molecular interactions
Regulation
External references
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ID History
- Gene history

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Gene: Gm27175 ENSMUSG00000099315

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Description

predicted gene 27175 [Source:MGI Symbol;Acc:MGI:5521018]

Location

Chromosome 14: 69,739,827-69,769,570 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 17 transcripts (splice variants) and 2 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000183759.2	Gm27175-201	606	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000361800.1	Gm27175-215	1841	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361802.1	Gm27175-217	1671	No protein	-	lncRNA		-
ENSMUST00000361788.1	Gm27175-203	1005	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361793.1	Gm27175-208	891	No protein	-	lncRNA		-
ENSMUST00000361791.1	Gm27175-206	809	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361797.1	Gm27175-212	796	No protein	-	lncRNA		-
ENSMUST00000361794.1	Gm27175-209	791	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361798.1	Gm27175-213	787	No protein	-	lncRNA		-
ENSMUST00000361795.1	Gm27175-210	772	No protein	-	lncRNA		-
ENSMUST00000361792.1	Gm27175-207	753	No protein	-	lncRNA		-
ENSMUST00000361801.1	Gm27175-216	739	No protein	-	lncRNA		-
ENSMUST00000361796.1	Gm27175-211	714	No protein	-	lncRNA		-
ENSMUST00000361799.1	Gm27175-214	712	No protein	-	lncRNA		-
ENSMUST00000361787.1	Gm27175-202	697	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361789.1	Gm27175-204	556	No protein	-	lncRNA		-
ENSMUST00000361790.1	Gm27175-205	550	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data