Summary
- Splice variants
- Transcript comparison
- Gene alleles
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Comparative Genomics
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
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ID History
- Gene history

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Gene: Gm27223 ENSMUSG00000098255

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Description

predicted gene 27223 [Source:MGI Symbol;Acc:MGI:5521066]

Location

Chromosome 14: 69,521,577-69,551,320 forward strand.

GRCm39:CM001007.3

About this gene

This gene has 19 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000361579.1	Gm27223-202	876	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361590.1	Gm27223-213	1841	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361591.1	Gm27223-214	1671	No protein	-	lncRNA		-
ENSMUST00000361592.1	Gm27223-215	1620	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361584.1	Gm27223-207	1150	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361593.1	Gm27223-216	1005	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361585.1	Gm27223-208	891	No protein	-	lncRNA		-
ENSMUST00000361580.1	Gm27223-203	809	No protein	-	lncRNA		-
ENSMUST00000361587.1	Gm27223-210	797	No protein	-	lncRNA		-
ENSMUST00000361589.1	Gm27223-212	796	No protein	-	lncRNA		-
ENSMUST00000361586.1	Gm27223-209	791	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000361583.1	Gm27223-206	767	No protein	-	lncRNA		-
ENSMUST00000361588.1	Gm27223-211	703	No protein	-	lncRNA		-
ENSMUST00000361582.1	Gm27223-205	697	No protein	-	lncRNA		-
ENSMUST00000361581.1	Gm27223-204	675	No protein	-	lncRNA		-
ENSMUST00000184653.2	Gm27223-201	606	No protein	-	lncRNA		TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000361595.1	Gm27223-218	555	No protein	-	lncRNA		-
ENSMUST00000361596.1	Gm27223-219	523	No protein	-	lncRNA		-
ENSMUST00000361594.1	Gm27223-217	325	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data