Gene: 1700086O06Rik ENSMUSG00000097080

Description

RIKEN cDNA 1700086O06 gene [Source:MGI Symbol;Acc:MGI:1920766]

Location

Chromosome 18: 38,371,428-38,383,690 reverse strand.

GRCm39:CM001011.3

About this gene

This gene has 51 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000181757.10	1700086O06Rik-201	1275	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000241151.2	1700086O06Rik-208	2482	No protein	-	lncRNA	-
ENSMUST00000235608.4	1700086O06Rik-204	1971	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000235525.4	1700086O06Rik-203	1862	No protein	-	lncRNA	-
ENSMUST00000240942.2	1700086O06Rik-207	1794	No protein	-	lncRNA	-
ENSMUST00000243234.2	1700086O06Rik-213	1596	No protein	-	lncRNA	-
ENSMUST00000241608.2	1700086O06Rik-210	1428	No protein	-	lncRNA	-
ENSMUST00000315016.1	1700086O06Rik-217	1403	No protein	-	lncRNA	-
ENSMUST00000181871.5	1700086O06Rik-202	1342	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000242232.2	1700086O06Rik-211	1329	No protein	-	lncRNA	-
ENSMUST00000243025.2	1700086O06Rik-212	1300	No protein	-	lncRNA	-
ENSMUST00000244053.2	1700086O06Rik-215	1228	No protein	-	lncRNA	-
ENSMUST00000315018.1	1700086O06Rik-219	1200	No protein	-	lncRNA	-
ENSMUST00000315017.1	1700086O06Rik-218	1020	No protein	-	lncRNA	-
ENSMUST00000315034.1	1700086O06Rik-234	992	No protein	-	lncRNA	-
ENSMUST00000243520.2	1700086O06Rik-214	979	No protein	-	lncRNA	-
ENSMUST00000315051.1	1700086O06Rik-251	885	No protein	-	lncRNA	-
ENSMUST00000315049.1	1700086O06Rik-249	870	No protein	-	lncRNA	-
ENSMUST00000235818.4	1700086O06Rik-205	861	No protein	-	lncRNA	-
ENSMUST00000315048.1	1700086O06Rik-248	854	No protein	-	lncRNA	-
ENSMUST00000236219.2	1700086O06Rik-206	834	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000315021.1	1700086O06Rik-222	805	No protein	-	lncRNA	-
ENSMUST00000241451.2	1700086O06Rik-209	789	No protein	-	lncRNA	-
ENSMUST00000315019.1	1700086O06Rik-220	752	No protein	-	lncRNA	-
ENSMUST00000315037.1	1700086O06Rik-237	751	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000315022.1	1700086O06Rik-223	689	No protein	-	lncRNA	-
ENSMUST00000315046.1	1700086O06Rik-246	663	No protein	-	lncRNA	-
ENSMUST00000315035.1	1700086O06Rik-235	629	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000315020.1	1700086O06Rik-221	580	No protein	-	lncRNA	-
ENSMUST00000244228.2	1700086O06Rik-216	561	No protein	-	lncRNA	-
ENSMUST00000315036.1	1700086O06Rik-236	552	No protein	-	lncRNA	-
ENSMUST00000315044.1	1700086O06Rik-244	550	No protein	-	lncRNA	-
ENSMUST00000315028.1	1700086O06Rik-228	520	No protein	-	lncRNA	-
ENSMUST00000315030.1	1700086O06Rik-230	514	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000315026.1	1700086O06Rik-226	510	No protein	-	lncRNA	-
ENSMUST00000315042.1	1700086O06Rik-242	508	No protein	-	lncRNA	-
ENSMUST00000315041.1	1700086O06Rik-241	507	No protein	-	lncRNA	-
ENSMUST00000315040.1	1700086O06Rik-240	493	No protein	-	lncRNA	-
ENSMUST00000315047.1	1700086O06Rik-247	456	No protein	-	lncRNA	-
ENSMUST00000315043.1	1700086O06Rik-243	442	No protein	-	lncRNA	-
ENSMUST00000315023.1	1700086O06Rik-224	423	No protein	-	lncRNA	-
ENSMUST00000315027.1	1700086O06Rik-227	412	No protein	-	lncRNA	-
ENSMUST00000315029.1	1700086O06Rik-229	412	No protein	-	lncRNA	-
ENSMUST00000315033.1	1700086O06Rik-233	380	No protein	-	lncRNA	-
ENSMUST00000315031.1	1700086O06Rik-231	378	No protein	-	lncRNA	-
ENSMUST00000315039.1	1700086O06Rik-239	355	No protein	-	lncRNA	-
ENSMUST00000315025.1	1700086O06Rik-225	346	No protein	-	lncRNA	-
ENSMUST00000315038.1	1700086O06Rik-238	305	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000315045.1	1700086O06Rik-245	285	No protein	-	lncRNA	-
ENSMUST00000315032.1	1700086O06Rik-232	273	No protein	-	lncRNA	-
ENSMUST00000315050.1	1700086O06Rik-250	252	No protein	-	lncRNA	-