Gene: Ube2d2a ENSMUSG00000091896

Description

ubiquitin-conjugating enzyme E2D 2A [Source:MGI Symbol;Acc:MGI:1930715]

Gene Synonyms

1500034D03Rik, ubc4

Location

Chromosome 18: 35,904,611-35,942,547 forward strand.

GRCm39:CM001011.3

About this gene

This gene has 9 transcripts (splice variants), 137 orthologues, 15 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000170693.9	Ube2d2a-201	2480	147aa	ENSMUSP00000132446.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS50254	P62838 Q3UT95	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000237984.2	Ube2d2a-209	553	50aa	ENSMUSP00000158464.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BBD7	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000236484.2	Ube2d2a-206	535	92aa	ENSMUSP00000158165.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BAN1	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000236550.2	Ube2d2a-207	335	93aa	ENSMUSP00000157903.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A494BA56	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000237482.2	Ube2d2a-208	348	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000236235.2	Ube2d2a-205	8159	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235351.2	Ube2d2a-203	3457	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235516.2	Ube2d2a-204	884	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-
ENSMUST00000235170.2	Ube2d2a-202	632	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-