Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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Ontologies
- GO: Anatomical entity
Phenotypes
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ID History
- Gene history

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Gene: Gm17102 ENSMUSG00000091864

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Description

predicted gene 17102 [Source:MGI Symbol;Acc:MGI:4937929]

Location

Chromosome 7: 40,995,568-41,098,741 forward strand.

GRCm39:CM001000.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000277318.1	Gm17102-202	930	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENSMUST00000170929.3	Gm17102-201	2149	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000277326.1	Gm17102-210	1653	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000277319.1	Gm17102-203	1269	No protein	-	lncRNA		-
ENSMUST00000277323.1	Gm17102-207	1159	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000277322.1	Gm17102-206	1128	No protein	-	lncRNA		-
ENSMUST00000277320.1	Gm17102-204	1127	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000277324.1	Gm17102-208	1123	No protein	-	lncRNA		-
ENSMUST00000277331.1	Gm17102-215	888	No protein	-	lncRNA		-
ENSMUST00000277329.1	Gm17102-213	771	No protein	-	lncRNA		-
ENSMUST00000277335.1	Gm17102-217	771	No protein	-	lncRNA		-
ENSMUST00000277334.1	Gm17102-216	762	No protein	-	lncRNA		-
ENSMUST00000277328.1	Gm17102-212	712	No protein	-	lncRNA		-
ENSMUST00000277325.1	Gm17102-209	692	No protein	-	lncRNA		-
ENSMUST00000277327.1	Gm17102-211	689	No protein	-	lncRNA		-
ENSMUST00000277330.1	Gm17102-214	669	No protein	-	lncRNA		-
ENSMUST00000277321.1	Gm17102-205	515	No protein	-	lncRNA		-
ENSMUST00000277336.1	Gm17102-218	313	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data