Gene: Gm43154 ENSMUSG00000086804

Description

predicted gene 43154 [Source:MGI Symbol;Acc:MGI:5663291]

Location

Chromosome 6: 31,582,117-31,774,988 forward strand.

GRCm39:CM000999.3

About this gene

This gene has 82 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000336688.1	Gm43154-215	1290	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336723.1	Gm43154-250	2633	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000209562.2	Gm43154-206	1884	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336748.1	Gm43154-275	1721	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000209658.2	Gm43154-208	1442	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000211225.2	Gm43154-214	1420	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336741.1	Gm43154-268	1417	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000210387.3	Gm43154-211	1359	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336736.1	Gm43154-263	1335	No protein	-	lncRNA	-
ENSMUST00000336721.1	Gm43154-248	1234	No protein	-	lncRNA	-
ENSMUST00000336729.1	Gm43154-256	1199	No protein	-	lncRNA	-
ENSMUST00000209659.2	Gm43154-209	1165	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336705.1	Gm43154-232	1151	No protein	-	lncRNA	-
ENSMUST00000336746.1	Gm43154-273	1147	No protein	-	lncRNA	-
ENSMUST00000336695.1	Gm43154-222	1141	No protein	-	lncRNA	-
ENSMUST00000136224.3	Gm43154-202	1078	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000210190.2	Gm43154-210	1051	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336711.1	Gm43154-238	1040	No protein	-	lncRNA	-
ENSMUST00000209571.2	Gm43154-207	1034	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336698.1	Gm43154-225	1024	No protein	-	lncRNA	-
ENSMUST00000336697.1	Gm43154-224	1019	No protein	-	lncRNA	-
ENSMUST00000336744.1	Gm43154-271	982	No protein	-	lncRNA	-
ENSMUST00000336753.1	Gm43154-280	960	No protein	-	lncRNA	-
ENSMUST00000336728.1	Gm43154-255	950	No protein	-	lncRNA	-
ENSMUST00000210985.2	Gm43154-213	932	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336694.1	Gm43154-221	926	No protein	-	lncRNA	-
ENSMUST00000336689.1	Gm43154-216	917	No protein	-	lncRNA	-
ENSMUST00000336715.1	Gm43154-242	914	No protein	-	lncRNA	-
ENSMUST00000336737.1	Gm43154-264	901	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000210892.3	Gm43154-212	892	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336713.1	Gm43154-240	886	No protein	-	lncRNA	-
ENSMUST00000336734.1	Gm43154-261	862	No protein	-	lncRNA	-
ENSMUST00000336727.1	Gm43154-254	855	No protein	-	lncRNA	-
ENSMUST00000336745.1	Gm43154-272	852	No protein	-	lncRNA	-
ENSMUST00000336722.1	Gm43154-249	843	No protein	-	lncRNA	-
ENSMUST00000336724.1	Gm43154-251	842	No protein	-	lncRNA	-
ENSMUST00000336750.1	Gm43154-277	841	No protein	-	lncRNA	-
ENSMUST00000336709.1	Gm43154-236	827	No protein	-	lncRNA	-
ENSMUST00000336739.1	Gm43154-266	826	No protein	-	lncRNA	-
ENSMUST00000336712.1	Gm43154-239	825	No protein	-	lncRNA	-
ENSMUST00000336716.1	Gm43154-243	819	No protein	-	lncRNA	-
ENSMUST00000336718.1	Gm43154-245	814	No protein	-	lncRNA	-
ENSMUST00000336714.1	Gm43154-241	812	No protein	-	lncRNA	-
ENSMUST00000336751.1	Gm43154-278	812	No protein	-	lncRNA	-
ENSMUST00000336749.1	Gm43154-276	792	No protein	-	lncRNA	-
ENSMUST00000336725.1	Gm43154-252	785	No protein	-	lncRNA	-
ENSMUST00000336692.1	Gm43154-219	778	No protein	-	lncRNA	-
ENSMUST00000336735.1	Gm43154-262	758	No protein	-	lncRNA	-
ENSMUST00000336752.1	Gm43154-279	742	No protein	-	lncRNA	-
ENSMUST00000336738.1	Gm43154-265	740	No protein	-	lncRNA	-
ENSMUST00000336703.1	Gm43154-230	703	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000336696.1	Gm43154-223	697	No protein	-	lncRNA	-
ENSMUST00000336693.1	Gm43154-220	696	No protein	-	lncRNA	-
ENSMUST00000336719.1	Gm43154-246	679	No protein	-	lncRNA	-
ENSMUST00000336707.1	Gm43154-234	659	No protein	-	lncRNA	-
ENSMUST00000336704.1	Gm43154-231	656	No protein	-	lncRNA	-
ENSMUST00000149613.3	Gm43154-204	640	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000336717.1	Gm43154-244	635	No protein	-	lncRNA	-
ENSMUST00000336743.1	Gm43154-270	632	No protein	-	lncRNA	-
ENSMUST00000336706.1	Gm43154-233	624	No protein	-	lncRNA	-
ENSMUST00000336700.1	Gm43154-227	619	No protein	-	lncRNA	-
ENSMUST00000336754.1	Gm43154-281	615	No protein	-	lncRNA	-
ENSMUST00000336747.1	Gm43154-274	602	No protein	-	lncRNA	-
ENSMUST00000336691.1	Gm43154-218	600	No protein	-	lncRNA	-
ENSMUST00000336702.1	Gm43154-229	596	No protein	-	lncRNA	-
ENSMUST00000336710.1	Gm43154-237	596	No protein	-	lncRNA	-
ENSMUST00000336730.1	Gm43154-257	593	No protein	-	lncRNA	-
ENSMUST00000336732.1	Gm43154-259	592	No protein	-	lncRNA	-
ENSMUST00000209254.2	Gm43154-205	580	No protein	-	lncRNA	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000336755.1	Gm43154-282	575	No protein	-	lncRNA	-
ENSMUST00000336742.1	Gm43154-269	569	No protein	-	lncRNA	-
ENSMUST00000336699.1	Gm43154-226	557	No protein	-	lncRNA	-
ENSMUST00000336701.1	Gm43154-228	547	No protein	-	lncRNA	-
ENSMUST00000336708.1	Gm43154-235	547	No protein	-	lncRNA	-
ENSMUST00000336733.1	Gm43154-260	545	No protein	-	lncRNA	-
ENSMUST00000336720.1	Gm43154-247	540	No protein	-	lncRNA	-
ENSMUST00000336731.1	Gm43154-258	532	No protein	-	lncRNA	-
ENSMUST00000336726.1	Gm43154-253	514	No protein	-	lncRNA	-
ENSMUST00000336690.1	Gm43154-217	511	No protein	-	lncRNA	-
ENSMUST00000336740.1	Gm43154-267	502	No protein	-	lncRNA	-
ENSMUST00000139483.2	Gm43154-203	462	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000124919.8	Gm43154-201	451	No protein	-	lncRNA	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,