Gene: Gm15638 ENSMUSG00000085826

Description

predicted gene 15638 [Source:MGI Symbol;Acc:MGI:3783082]

Gene Synonyms

Gm41457

Location

Chromosome 16: 45,765,903-45,791,733 forward strand.

GRCm39:CM001009.3

About this gene

This gene has 24 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSMUST00000154775.2	Gm15638-203	2945	No protein	-	lncRNA	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000244817.1	Gm15638-208	2533	No protein	-	lncRNA	-
ENSMUST00000128159.4	Gm15638-201	2081	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000242919.2	Gm15638-207	2020	No protein	-	lncRNA	-
ENSMUST00000302209.1	Gm15638-218	1890	No protein	-	lncRNA	-
ENSMUST00000241753.2	Gm15638-205	1586	No protein	-	lncRNA	-
ENSMUST00000134359.4	Gm15638-202	1400	No protein	-	lncRNA	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000302200.1	Gm15638-209	1342	No protein	-	lncRNA	-
ENSMUST00000302204.1	Gm15638-213	1217	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000241345.2	Gm15638-204	1208	No protein	-	lncRNA	-
ENSMUST00000302208.1	Gm15638-217	1204	No protein	-	lncRNA	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000302210.1	Gm15638-219	1073	No protein	-	lncRNA	-
ENSMUST00000302202.1	Gm15638-211	1016	No protein	-	lncRNA	-
ENSMUST00000302203.1	Gm15638-212	1013	No protein	-	lncRNA	-
ENSMUST00000302201.1	Gm15638-210	923	No protein	-	lncRNA	-
ENSMUST00000302212.1	Gm15638-221	910	No protein	-	lncRNA	-
ENSMUST00000302213.1	Gm15638-222	843	No protein	-	lncRNA	-
ENSMUST00000242019.2	Gm15638-206	817	No protein	-	lncRNA	-
ENSMUST00000302211.1	Gm15638-220	654	No protein	-	lncRNA	-
ENSMUST00000302206.1	Gm15638-215	616	No protein	-	lncRNA	-
ENSMUST00000302214.1	Gm15638-223	563	No protein	-	lncRNA	-
ENSMUST00000302207.1	Gm15638-216	476	No protein	-	lncRNA	-
ENSMUST00000302215.1	Gm15638-224	449	No protein	-	lncRNA	-
ENSMUST00000302205.1	Gm15638-214	411	No protein	-	lncRNA	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Gm15638 ENSMUSG00000085826

Strains

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Gene: Gm15638 ENSMUSG00000085826

Strains

About Us

Get help

Our sister sites

Follow us