Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
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Ontologies
- GO: Anatomical entity
Phenotypes
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Molecular interactions
Regulation
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ID History
- Gene history

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Gene: Gm12637 ENSMUSG00000085209

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Description

predicted gene 12637 [Source:MGI Symbol;Acc:MGI:3650764]

Location

Chromosome 4: 92,372,476-92,466,813 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 18 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000327917.1	Gm12637-202	696	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327924.1	Gm12637-209	912	No protein	-	lncRNA		-
ENSMUST00000130501.3	Gm12637-201	878	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENSMUST00000327925.1	Gm12637-210	864	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327926.1	Gm12637-211	785	No protein	-	lncRNA		-
ENSMUST00000327932.1	Gm12637-216	780	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327927.1	Gm12637-212	758	No protein	-	lncRNA		-
ENSMUST00000327918.1	Gm12637-203	605	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000327919.1	Gm12637-204	573	No protein	-	lncRNA		-
ENSMUST00000327921.1	Gm12637-206	503	No protein	-	lncRNA		-
ENSMUST00000327922.1	Gm12637-207	496	No protein	-	lncRNA		-
ENSMUST00000327929.1	Gm12637-214	443	No protein	-	lncRNA		-
ENSMUST00000327920.1	Gm12637-205	422	No protein	-	lncRNA		-
ENSMUST00000327923.1	Gm12637-208	402	No protein	-	lncRNA		-
ENSMUST00000327933.1	Gm12637-217	317	No protein	-	lncRNA		-
ENSMUST00000327930.1	Gm12637-215	315	No protein	-	lncRNA		-
ENSMUST00000327928.1	Gm12637-213	311	No protein	-	lncRNA		-
ENSMUST00000327934.1	Gm12637-218	301	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data