Gene: Vmn1r219 ENSMUSG00000061376

Description

vomeronasal 1 receptor 219 [Source:MGI Symbol;Acc:MGI:2159676]

Gene Synonyms

V1rh13

Location

Chromosome 13: 23,343,482-23,352,324 forward strand.

GRCm39:CM001006.3

About this gene

This gene has 5 transcripts (splice variants), 307 orthologues and 237 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000227388.2	Vmn1r219-203	7948	312aa	ENSMUSP00000154415.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26334	Q8R271	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000228666.2	Vmn1r219-205	5993	312aa	ENSMUSP00000154240.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26334	Q8R271	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000226845.2	Vmn1r219-202	5979	312aa	ENSMUSP00000154796.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26334	Q8R271	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000228113.2	Vmn1r219-204	5639	312aa	ENSMUSP00000154069.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26334	Q8R271	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSMUST00000076180.2	Vmn1r219-201	939	312aa	ENSMUSP00000075537.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS26334	Q8R271	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Vmn1r219 ENSMUSG00000061376

Strains

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Gene: Vmn1r219 ENSMUSG00000061376

Strains

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