Summary
- Splice variants
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Gene: A930004D18Rik ENSMUSG00000054057

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Description

RIKEN cDNA A930004D18 gene [Source:MGI Symbol;Acc:MGI:1925190]

Location

Chromosome 2: 18,024,392-18,042,548 reverse strand.

GRCm39:CM000995.3

About this gene

This gene has 13 transcripts (splice variants).

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000066163.3	A930004D18Rik-201	3217	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000354651.1	A930004D18Rik-210	1111	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000354650.1	A930004D18Rik-209	909	No protein	-	lncRNA		-
ENSMUST00000354652.1	A930004D18Rik-211	870	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000354648.1	A930004D18Rik-207	811	No protein	-	lncRNA		-
ENSMUST00000354653.1	A930004D18Rik-212	765	No protein	-	lncRNA		-
ENSMUST00000354645.1	A930004D18Rik-204	692	No protein	-	lncRNA		-
ENSMUST00000354649.1	A930004D18Rik-208	674	No protein	-	lncRNA		-
ENSMUST00000354647.1	A930004D18Rik-206	580	No protein	-	lncRNA		-
ENSMUST00000354646.1	A930004D18Rik-205	547	No protein	-	lncRNA		-
ENSMUST00000354654.1	A930004D18Rik-213	475	No protein	-	lncRNA		-
ENSMUST00000151857.2	A930004D18Rik-203	426	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000135980.2	A930004D18Rik-202	363	No protein	-	lncRNA		TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,

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Strains

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Genomic alignments

Gene tree (Not available)

Orthologues (Not available)

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data