Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
- Genomic alignments
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- Gene gain/loss tree
- Orthologues
- Paralogues
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  - Orthologues
  - Paralogues
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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ID History
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Gene: 4930548G14Rik ENSMUSG00000051198

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Description

RIKEN cDNA 4930548G14 gene [Source:MGI Symbol;Acc:MGI:1922531]

Location

Chromosome 15: 46,486,691-46,503,254 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 19 transcripts (splice variants) and 3 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	Flags
ENSMUST00000190364.3	4930548G14Rik-202	1195	No protein	-	lncRNA		A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENSMUST00000365987.1	4930548G14Rik-216	1934	No protein	-	lncRNA		-
ENSMUST00000365986.1	4930548G14Rik-215	1922	No protein	-	lncRNA		-
ENSMUST00000365989.1	4930548G14Rik-218	1687	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000060825.7	4930548G14Rik-201	1037	No protein	-	lncRNA		TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENSMUST00000365975.1	4930548G14Rik-204	1035	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000365981.1	4930548G14Rik-210	1027	No protein	-	lncRNA		-
ENSMUST00000365984.1	4930548G14Rik-213	1012	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000365983.1	4930548G14Rik-212	1001	No protein	-	lncRNA		-
ENSMUST00000365979.1	4930548G14Rik-208	976	No protein	-	lncRNA		-
ENSMUST00000365980.1	4930548G14Rik-209	955	No protein	-	lncRNA		-
ENSMUST00000365985.1	4930548G14Rik-214	948	No protein	-	lncRNA		-
ENSMUST00000365978.1	4930548G14Rik-207	926	No protein	-	lncRNA		-
ENSMUST00000365974.1	4930548G14Rik-203	924	No protein	-	lncRNA		-
ENSMUST00000365982.1	4930548G14Rik-211	901	No protein	-	lncRNA		-
ENSMUST00000365976.1	4930548G14Rik-205	797	No protein	-	lncRNA		-
ENSMUST00000365988.1	4930548G14Rik-217	787	No protein	-	lncRNA		A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000365977.1	4930548G14Rik-206	363	No protein	-	lncRNA		-
ENSMUST00000365990.1	4930548G14Rik-219	345	No protein	-	lncRNA		-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data