Gene: Gtpbp1 ENSMUSG00000042535

Description

GTP binding protein 1 [Source:MGI Symbol;Acc:MGI:109443]

Gene Synonyms

GP-1, GTPBP1

Location

Chromosome 15: 79,575,046-79,605,680 forward strand.

GRCm39:CM001008.3

About this gene

This gene has 9 transcripts (splice variants), 271 orthologues, 18 paralogues and is associated with 1 phenotype.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000046463.10	Gtpbp1-201	3449	668aa	ENSMUSP00000043575.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS27648	O08582	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000229046.2	Gtpbp1-203	657	145aa	ENSMUSP00000155617.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8W6Z1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000228991.2	Gtpbp1-202	616	201aa	ENSMUSP00000154947.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VHC2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000229583.2	Gtpbp1-204	593	196aa	ENSMUSP00000155748.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8W725	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000230262.2	Gtpbp1-206	522	174aa	ENSMUSP00000155719.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8VI47	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSMUST00000230898.2	Gtpbp1-208	348	80aa	ENSMUSP00000155128.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A2R8W6M4	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000231095.2	Gtpbp1-209	763	137aa	ENSMUSP00000155592.2	Nonsense mediated decay		A0A2R8VKJ2	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000230023.2	Gtpbp1-205	622	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined		-	-
ENSMUST00000230496.2	Gtpbp1-207	490	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron		-	-