Gene: Alg3 ENSMUSG00000033809

Description

ALG3 alpha-1,3- mannosyltransferase [Source:MGI Symbol;Acc:MGI:1098592]

Gene Synonyms

D16Ertd36e

Location

Chromosome 16: 20,424,124-20,430,485 reverse strand.

GRCm39:CM001009.3

About this gene

This gene has 14 transcripts (splice variants), 200 orthologues and is associated with 3 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000045918.15	Alg3-201	1451	438aa	ENSMUSP00000045272.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS37289	Q8K2A8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000232458.2	Alg3-214	1319	364aa	ENSMUSP00000156158.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P6Y8	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000231531.2	Alg3-209	1280	316aa	ENSMUSP00000156241.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P726	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000232319.2	Alg3-212	997	242aa	ENSMUSP00000156269.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P794	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENSMUST00000231749.2	Alg3-210	754	188aa	ENSMUSP00000156234.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A338P722	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000231386.2	Alg3-206	1309	266aa	ENSMUSP00000156072.2	Nonsense mediated decay		A0A338P6Q6	-
ENSMUST00000123774.2	Alg3-202	1308	107aa	ENSMUSP00000123378.2	Nonsense mediated decay		D6RCW8	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000231362.2	Alg3-205	1275	128aa	ENSMUSP00000155979.2	Nonsense mediated decay		A0A338P6V1	-
ENSMUST00000231904.2	Alg3-211	1239	69aa	ENSMUSP00000156363.2	Nonsense mediated decay		A0A338P7B5	-
ENSMUST00000231471.2	Alg3-208	1215	208aa	ENSMUSP00000156022.2	Nonsense mediated decay		A0A338P6N0	-
ENSMUST00000231387.2	Alg3-207	1158	134aa	ENSMUSP00000155988.2	Nonsense mediated decay		A0A338P6K1	-
ENSMUST00000127454.8	Alg3-203	1132	173aa	ENSMUSP00000120559.2	Nonsense mediated decay		F6XUH0	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000147867.3	Alg3-204	1078	69aa	ENSMUSP00000156272.2	Nonsense mediated decay		A0A338P7B5	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000232451.2	Alg3-213	1058	86aa	ENSMUSP00000156184.2	Nonsense mediated decay		A0A338P706	-

Strains

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

Gene: Alg3 ENSMUSG00000033809

Strains

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Gene: Alg3 ENSMUSG00000033809

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