Gene: Pus1 ENSMUSG00000029507

Description

pseudouridine synthase 1 [Source:MGI Symbol;Acc:MGI:1929237]

Gene Synonyms

A730013B20Rik, MPUS1, mPus1p

Location

Chromosome 5: 110,921,533-110,928,525 reverse strand.

GRCm39:CM000998.3

About this gene

This gene has 7 transcripts (splice variants), 207 orthologues, 2 paralogues and is associated with 44 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000086643.12	Pus1-203	1868	441aa	ENSMUSP00000083844.6	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19530	H7BX59	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000031483.15	Pus1-202	1814	423aa	ENSMUSP00000031483.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS19531	Q9WU56-1	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000031481.13	Pus1-201	1563	393aa	ENSMUSP00000031481.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39212	Q9WU56-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000170468.8	Pus1-207	1510	393aa	ENSMUSP00000130814.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS39212	Q9WU56-2	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENSMUST00000112426.8	Pus1-204	1389	347aa	ENSMUSP00000108045.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS84929	Q9WU56-4	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000136483.8	Pus1-205	701	147aa	ENSMUSP00000115143.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3YWU8	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSMUST00000149208.2	Pus1-206	527	162aa	ENSMUSP00000115468.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		D3Z092	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,