Gene: Sh3gl2 ENSMUSG00000028488

Description

SH3-domain GRB2-like 2 [Source:MGI Symbol;Acc:MGI:700009]

Gene Synonyms

9530001L19Rik, B930049H17Rik, EEN-B1, EEN1, Sh3d2a, endophilin A1, endophilin I

Location

Chromosome 4: 85,123,363-85,557,432 forward strand.

GRCm39:CM000997.3

About this gene

This gene has 5 transcripts (splice variants), 178 orthologues, 12 paralogues and is associated with 14 phenotypes.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	Flags
ENSMUST00000030212.15	Sh3gl2-201	2822	352aa	ENSMUSP00000030212.9	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS18303	Q62420	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000107189.8	Sh3gl2-204	3231	245aa	ENSMUSP00000102807.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q8BXU5	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000107188.10	Sh3gl2-203	2286	431aa	ENSMUSP00000102806.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ALV3	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENSMUST00000133109.2	Sh3gl2-205	706	231aa	ENSMUSP00000117573.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		F6ZL13	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSMUST00000107184.8	Sh3gl2-202	671	182aa	ENSMUSP00000102802.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A2ALV1	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,