Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: Blm MGP_CAROLIEiJ_G0029907

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Description

BLM RecQ like helicase [Source:NCBI gene;Acc:110298490]

Location

Chromosome 7: 83,020,436-83,101,423 reverse strand.

CAROLI_EIJ_v1.1:LT608243.1

About this gene

This gene has 10 transcripts (splice variants), 199 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
MGP_CAROLIEiJ_T0080394.1	Blm-203	4757	1412aa	MGP_CAROLIEiJ_P0080394	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0080393.1	Blm-202	4578	1409aa	MGP_CAROLIEiJ_P0080393	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0080392.1	Blm-201	993	154aa	MGP_CAROLIEiJ_P0080392	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-
MGP_CAROLIEiJ_T0080398.1	Blm-207	460	48aa	MGP_CAROLIEiJ_P0080398	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0080397.1	Blm-206	394	45aa	MGP_CAROLIEiJ_P0080397	Nonsense mediated decay	-
MGP_CAROLIEiJ_T0080395.1	Blm-204	539	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-
MGP_CAROLIEiJ_T0080399.1	Blm-208	3544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0080400.1	Blm-209	2479	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0080401.1	Blm-210	747	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-
MGP_CAROLIEiJ_T0080396.1	Blm-205	485	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-

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Summary

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