Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: Homer1 MGP_CAROLIEiJ_G0018778

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Description

homer scaffolding protein 1 [Source:MGI Symbol;Acc:MGI:1347345]

Location

Chromosome 13: 87,018,717-87,116,756 forward strand.

CAROLI_EIJ_v1.1:LT608247.1

About this gene

This gene has 11 transcripts (splice variants), 267 orthologues and 2 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0035126.1	Homer1-211	3219	370aa	MGP_CAROLIEiJ_P0035126	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QX20	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0035118.1	Homer1-203	5622	186aa	MGP_CAROLIEiJ_P0035118	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035119.1	Homer1-204	3045	366aa	MGP_CAROLIEiJ_P0035119	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QQA6	-
MGP_CAROLIEiJ_T0035122.1	Homer1-207	2767	354aa	MGP_CAROLIEiJ_P0035122	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P7RRV6	-
MGP_CAROLIEiJ_T0035117.1	Homer1-202	2573	233aa	MGP_CAROLIEiJ_P0035117	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035116.1	Homer1-201	2484	193aa	MGP_CAROLIEiJ_P0035116	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035120.1	Homer1-206	810	192aa	MGP_CAROLIEiJ_P0035120	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035124.1	Homer1-209	806	191aa	MGP_CAROLIEiJ_P0035124	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035123.1	Homer1-208	801	204aa	MGP_CAROLIEiJ_P0035123	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035121.1	Homer1-205	774	180aa	MGP_CAROLIEiJ_P0035121	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0035125.1	Homer1-210	765	224aa	MGP_CAROLIEiJ_P0035125	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

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Summary

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