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Gene: Clpb MGP_CAROLIEiJ_G0030064

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Description

ClpB caseinolytic peptidase B [Source:MGI Symbol;Acc:MGI:1100517]

Location

Chromosome 7: 104,359,636-104,486,915 forward strand.

CAROLI_EIJ_v1.1:LT608243.1

About this gene

This gene has 10 transcripts (splice variants) and 201 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0081007.1	Clpb-203	2287	707aa	MGP_CAROLIEiJ_P0081007	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5Q1W6	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0081006.1	Clpb-202	4644	677aa	MGP_CAROLIEiJ_P0081006	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5Q067	-
MGP_CAROLIEiJ_T0081011.1	Clpb-207	630	158aa	MGP_CAROLIEiJ_P0081011	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0081012.1	Clpb-208	452	117aa	MGP_CAROLIEiJ_P0081012	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0081009.1	Clpb-205	724	150aa	MGP_CAROLIEiJ_P0081009	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0081014.1	Clpb-210	739	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0081013.1	Clpb-209	608	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0081010.1	Clpb-206	2170	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0081008.1	Clpb-204	2151	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0081005.1	Clpb-201	1170	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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