Summary
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Comparative Genomics
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Gene: Clns1a MGP_CAROLIEiJ_G0030007

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Description

chloride channel, nucleotide-sensitive, 1A [Source:MGI Symbol;Acc:MGI:109638]

Location

Chromosome 7: 100,362,480-100,387,098 forward strand.

CAROLI_EIJ_v1.1:LT608243.1

About this gene

This gene has 3 transcripts (splice variants) and 236 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0080746.1	Clns1a-201	1504	241aa	MGP_CAROLIEiJ_P0080746	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5Q0F1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0080748.1	Clns1a-203	2970	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0080747.1	Clns1a-202	393	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data