Summary
- Splice variants
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- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
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- Structural variants
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Gene: Clic1 MGP_CAROLIEiJ_G0021495

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Description

chloride intracellular channel 1 [Source:MGI Symbol;Acc:MGI:2148924]

Location

Chromosome 17: 31,790,594-31,799,680 forward strand.

CAROLI_EIJ_v1.1:LT608229.1

About this gene

This gene has 2 transcripts (splice variants), 260 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0044408.1	Clic1-201	1476	241aa	MGP_CAROLIEiJ_P0044408	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5RBF9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0044409.1	Clic1-202	850	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data