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Gene: Cdk5rap3 MGP_CAROLIEiJ_G0017039

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Description

CDK5 regulatory subunit associated protein 3 [Source:MGI Symbol;Acc:MGI:1933126]

Location

Chromosome 11: 92,678,781-92,687,397 reverse strand.

CAROLI_EIJ_v1.1:LT608241.1

About this gene

This gene has 11 transcripts (splice variants) and 203 orthologues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0029471.1	Cdk5rap3-202	2215	502aa	MGP_CAROLIEiJ_P0029471	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5QFQ4	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0029474.1	Cdk5rap3-205	768	145aa	MGP_CAROLIEiJ_P0029474	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029477.1	Cdk5rap3-208	758	124aa	MGP_CAROLIEiJ_P0029477	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029475.1	Cdk5rap3-206	566	140aa	MGP_CAROLIEiJ_P0029475	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029479.1	Cdk5rap3-210	488	80aa	MGP_CAROLIEiJ_P0029479	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
MGP_CAROLIEiJ_T0029470.1	Cdk5rap3-201	2166	112aa	MGP_CAROLIEiJ_P0029470	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0029476.1	Cdk5rap3-207	620	142aa	MGP_CAROLIEiJ_P0029476	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0029478.1	Cdk5rap3-209	617	45aa	MGP_CAROLIEiJ_P0029478	Nonsense mediated decay	-	-
MGP_CAROLIEiJ_T0029473.1	Cdk5rap3-204	1149	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0029480.1	Cdk5rap3-211	820	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
MGP_CAROLIEiJ_T0029472.1	Cdk5rap3-203	805	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Strains

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Genomic alignments

Gene tree

Orthologues

Paralogues (Not available)

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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