Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
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ID History
- Gene history

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Gene: Ybx3 MGP_CAROLIEiJ_G0028947

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Description

Y box protein 3 [Source:MGI Symbol;Acc:MGI:2137670]

Location

Chromosome 6: 128,334,807-128,358,417 reverse strand.

CAROLI_EIJ_v1.1:LT608245.1

About this gene

This gene has 5 transcripts (splice variants), 130 orthologues and 4 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
MGP_CAROLIEiJ_T0076385.1	Ybx3-201	1853	361aa	MGP_CAROLIEiJ_P0076385	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5PZC3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
MGP_CAROLIEiJ_T0076384.1	Ybx3-202	1684	292aa	MGP_CAROLIEiJ_P0076384	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A6P5PXI3	-
MGP_CAROLIEiJ_T0076386.1	Ybx3-203	837	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0076388.1	Ybx3-205	756	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
MGP_CAROLIEiJ_T0076387.1	Ybx3-204	1026	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

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Comparative Genomics

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Genomic alignments

Gene tree

Orthologues

Paralogues

Families (Not available)

More views of comparative genomics data, such as multiple alignments and synteny, are available on the Location page for this gene.

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Personal Data