Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

Configure this page

Share this page

Bookmark this page

.

Gene: VPS39 ENSMODG00000017928

.

Description

VPS39 subunit of HOPS complex [Source:UniProtKB Gene Name;Acc:A0A5F8HKC9]

Location

Primary_assembly 1: 199,599,268-199,662,610 reverse strand.

ASM229v1:CM000368.1

About this gene

This gene has 3 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMODT00000034977.2	VPS39-201	3457	886aa	ENSMODP00000033400.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F6XYZ3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMODT00000064614.1	VPS39-202	3424	875aa	ENSMODP00000052458.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F8GXT9	-
ENSMODT00000057616.1	VPS39-203	3359	852aa	ENSMODP00000060457.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A5F8HKC9	-

.

Summary

.

.