Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: VPS39 ENSMGAG00000011426

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Description

VPS39 subunit of HOPS complex [Source:UniProtKB Gene Name;Acc:A0A803Y7F5]

Location

Primary_assembly 5: 20,318,296-20,339,693 reverse strand.

Turkey_5.1:CM000966.2

About this gene

This gene has 4 transcripts (splice variants), 209 orthologues and 1 paralogue.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMGAT00000035454.1	VPS39-201	2695	886aa	ENSMGAP00000027630.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803Y783	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMGAT00000012840.2	VPS39-202	2662	875aa	ENSMGAP00000011956.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G1NFY6	-
ENSMGAT00000027809.1	VPS39-203	2524	829aa	ENSMGAP00000027702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803Y7F5	-
ENSMGAT00000029919.1	VPS39-204	2518	827aa	ENSMGAP00000034495.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A803YRU7	-

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Summary

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