Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
- GO: Anatomical entity
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
External references
Supporting evidence
ID History
- Gene history

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Gene: synj1 ENSMAMG00000013404

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Description

synaptojanin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9180]

Location

Primary_assembly 14: 16,204,875-16,225,603 reverse strand.

fMasArm1.2:LR535846.1

About this gene

This gene has 10 transcripts (splice variants), 217 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSMAMT00000020537.2	synj1-201	4610	1509aa	ENSMAMP00000020007.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q3M3U0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSMAMT00000020427.2	synj1-202	4259	1392aa	ENSMAMP00000019898.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q3LZ65	-
ENSMAMT00000063178.1	synj1-206	3243	1080aa	ENSMAMP00000041024.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N8X663	-
ENSMAMT00000042500.1	synj1-203	3194	1037aa	ENSMAMP00000051503.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N8XIG4	-
ENSMAMT00000066999.1	synj1-204	3170	1029aa	ENSMAMP00000050814.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N9AP60	-
ENSMAMT00000041657.1	synj1-205	3152	1023aa	ENSMAMP00000050914.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N8XDL8	-
ENSMAMT00000020450.2	synj1-207	3071	996aa	ENSMAMP00000019921.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q3MB12	-
ENSMAMT00000020499.2	synj1-208	3044	987aa	ENSMAMP00000019970.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A3Q3S974	-
ENSMAMT00000054127.1	synj1-209	2829	942aa	ENSMAMP00000049670.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N8XEC7	-
ENSMAMT00000041150.1	synj1-210	2664	887aa	ENSMAMP00000044493.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A7N8X343	-

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Summary

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