Summary
- Splice variants
- Transcript comparison
- Gene alleles
Sequence
- Secondary Structure
Comparative Genomics
Ontologies
Phenotypes
Genetic Variation
- Variant table
- Variant image
- Structural variants
Gene expression
Pathway
Molecular interactions
Regulation
External references
Supporting evidence
ID History
- Gene history

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Gene: PCDHGC5 ENSLAFG00000004545

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Description

protocadherin gamma subfamily C, 5 [Source:HGNC Symbol;Acc:HGNC:8718]

Location

SuperContig scaffold_1: 59,093,882-59,266,997 forward strand.

loxAfr3:GL010028.1

About this gene

This gene has 6 transcripts (splice variants), 94 orthologues and 15 paralogues.

Transcripts

Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSLAFT00000007572.3	PCDHGC5-206	2832	943aa	ENSLAFP00000006356.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3T087	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSLAFT00000030282.1	PCDHGC5-205	2814	938aa	ENSLAFP00000026273.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3UEL5	-
ENSLAFT00000025380.1	PCDHGC5-204	2805	934aa	ENSLAFP00000023504.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3U6P6	-
ENSLAFT00000004545.2	PCDHGC5-202	2796	932aa	ENSLAFP00000025001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3UAZ3	-
ENSLAFT00000004543.2	PCDHGC5-201	2430	809aa	ENSLAFP00000023189.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3U5T1	-
ENSLAFT00000020660.3	PCDHGC5-203	2403	801aa	ENSLAFP00000015943.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	G3TLU1	-

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Summary

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