Transcript: ENST00000333190.5 ZNF804B-201

Description

zinc finger protein 804B [Source:HGNC Symbol;Acc:HGNC:21958]

Gene Synonyms

FLJ32110

Location

Chromosome 7: 88,759,700-89,338,528 forward strand.

About this transcript

This transcript has 4 exons, is annotated with 11 domains and features, is associated with 269143 variant alleles and maps to 246 oligo probes.

Gene

This transcript is a product of gene ENSG00000182348.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000333190.5	ZNF804B-201	5823	1349aa	ENSP00000329638.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	CCDS5613	A4D1E1	NM_181646.5	The Matched Annotation from NCBI and EMBL-EBI is a collaboration between Ensembl/GENCODE and RefSeq. The MANE Select is a default transcript per human gene that is representative of biology, well-supported, expressed and highly-conserved. This transcript set matches GRCh38 and is 100% identical between RefSeq and Ensembl/GENCODE for 5' UTR, CDS, splicing and 3'UTR.MANE Select, A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000611114.1	ZNF804B-202	3968	1266aa	ENSP00000478506.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		A0A087WUA7	-	The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,

Summary

Statistics

Exons: 4, Coding exons: 4, Transcript length: 5,823 bps, Translation length: 1,349 residues

MANE

This MANE Select transcript contains ENSP00000329638 and matches to NM_181646.5 and NP_857597.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: A4D1E1

CCDS

This transcript is a member of the Human CCDS set: CCDS5613

Transcript Support Level (TSL)

TSL:1

Version

ENST00000333190.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000333190.5 ZNF804B-201

Summary

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Transcript: ENST00000333190.5 ZNF804B-201

Summary

About Us

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