Human (GRCh38.p14)
Description

chromobox 5 [Source:HGNC Symbol;Acc:HGNC:1555]

Gene Synonyms

HP1, HP1-ALPHA, HP1ALPHA, HP1HS-ALPHA

Location
About this transcript

This transcript has 5 exons, is annotated with 29 domains and features, is associated with 21209 variant alleles and maps to 873 oligo probes.

Transcript IDNamebpProteinTranslation IDBiotypeCCDSUniProt MatchRefSeq MatchFlags
ENST00000209875.9CBX5-20111546191aaENSP00000209875.4
 
Protein coding
CCDS8875P45973 V9HWG0 NM_012117.3MANE SelectEnsembl CanonicalGENCODE PrimaryGENCODE BasicAPPRIS P3TSL:1
ENST00000930392.1CBX5-22311589191aaENSP00000600451.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882084.1CBX5-2073300190aaENSP00000552143.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000930393.1CBX5-2242975191aaENSP00000600452.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882090.1CBX5-2132730191aaENSP00000552149.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882091.1CBX5-2142309190aaENSP00000552150.1
 
Protein coding
--GENCODE PrimaryGENCODE BasicAPPRIS ALT1
ENST00000882085.1CBX5-2081890191aaENSP00000552144.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000439541.6CBX5-2021832191aaENSP00000401009.2
 
Protein coding
CCDS8875P45973 V9HWG0 -GENCODE BasicAPPRIS P3TSL:1
ENST00000882092.1CBX5-2151682191aaENSP00000552151.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE PrimaryGENCODE BasicAPPRIS P3
ENST00000882086.1CBX5-2091681198aaENSP00000552145.1
 
Protein coding
--GENCODE PrimaryGENCODE Basic
ENST00000882087.1CBX5-2101564191aaENSP00000552146.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882095.1CBX5-2181562191aaENSP00000552154.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882093.1CBX5-2161540191aaENSP00000552152.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882094.1CBX5-2171359191aaENSP00000552153.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882096.1CBX5-2191052190aaENSP00000552155.1
 
Protein coding
--GENCODE BasicAPPRIS ALT1
ENST00000930391.1CBX5-222999191aaENSP00000600450.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882089.1CBX5-212914191aaENSP00000552148.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000550411.5CBX5-204894191aaENSP00000449207.1
 
Protein coding
CCDS8875P45973 V9HWG0 -GENCODE BasicAPPRIS P3TSL:1
ENST00000930389.1CBX5-220861191aaENSP00000600448.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000930395.1CBX5-226843191aaENSP00000600454.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000930396.1CBX5-227789191aaENSP00000600455.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000882088.1CBX5-211788191aaENSP00000552147.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000930394.1CBX5-225787191aaENSP00000600453.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000930397.1CBX5-228782191aaENSP00000600456.1
 
Protein coding
CCDS8875V9HWG0 -GENCODE BasicAPPRIS P3
ENST00000552562.1CBX5-20567591aaENSP00000450190.1
 
Protein coding
F8VNY3 -TSL:4CDS 3' incomplete
ENST00000930390.1CBX5-22158195aaENSP00000600449.1
 
Protein coding
--GENCODE Basic
ENST00000618078.1CBX5-2062627No protein-
 
Protein coding CDS not defined
--TSL:2
ENST00000547872.1CBX5-203745No protein-
 
Retained intron
--TSL:2
Statistics

Exons: 5, Coding exons: 4, Transcript length: 11,546 bps, Translation length: 191 residues

MANE

This MANE Select transcript contains ENSP00000209875 and matches to NM_012117.3 and NP_036249.1

Uniprot

This transcript corresponds to the following Uniprot identifiers: P45973

CCDS

This transcript is a member of the Human CCDS set: CCDS8875

Transcript Support Level (TSL)

TSL:1

Version

ENST00000209875.9

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.