Transcript: ENST00000627547.2 TGM4-211

Description

transglutaminase 4 [Source:HGNC Symbol;Acc:HGNC:11780]

Gene Synonyms

TGP

Location

About this transcript

This transcript has 6 exons, is annotated with 1 domain and feature, is associated with 16353 variant alleles and maps to 168 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000628744.3	TGM4-212	3391	684aa	ENSP00000487307.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	P49221	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, The GENCODE set is the gene set for human and mouse. GENCODE Basic is a subset of representative transcripts (splice variants).GENCODE basic,
ENST00000627547.2	TGM4-211	641	91aa	ENSP00000487489.1	Nonsense mediated decay	F8WCU8	-	-
ENST00000626379.1	TGM4-210	137	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000626185.1	TGM4-209	1746	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000629749.1	TGM4-213	707	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000625785.1	TGM4-208	544	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 6, Coding exons: 3, Transcript length: 641 bps, Translation length: 91 residues

Version

ENST00000627547.2

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.