Transcript: ENST00000562189.2 DDX11L16-244

Description

DEAD/H-box helicase 11 like 16 (pseudogene) [Source:NCBI gene (formerly Entrezgene);Acc:727856]

Location

Chromosome 15: 101,976,551-101,979,117 reverse strand.

About this transcript

This transcript has 3 exons and maps to 558 oligo probes.

Gene

This transcript is a product of gene ENSG00000290824.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000818386.1	DDX11L16-245	467	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000818389.1	DDX11L16-248	1762	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000818388.1	DDX11L16-247	1729	No protein	-	lncRNA	-	-
ENST00000562189.2	DDX11L16-244	1683	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000818397.1	DDX11L16-256	1670	No protein	-	lncRNA	-	-
ENST00000818392.1	DDX11L16-251	1553	No protein	-	lncRNA	-	-
ENST00000818391.1	DDX11L16-250	1517	No protein	-	lncRNA	-	-
ENST00000559159.5	DDX11L16-243	1488	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000818398.1	DDX11L16-257	1467	No protein	-	lncRNA	-	-
ENST00000818387.1	DDX11L16-246	1452	No protein	-	lncRNA	-	-
ENST00000818394.1	DDX11L16-253	1433	No protein	-	lncRNA	-	-
ENST00000818393.1	DDX11L16-252	1423	No protein	-	lncRNA	-	-
ENST00000818396.1	DDX11L16-255	1350	No protein	-	lncRNA	-	-
ENST00000818395.1	DDX11L16-254	1332	No protein	-	lncRNA	-	-
ENST00000818390.1	DDX11L16-249	1303	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,683 bps,

Transcript Support Level (TSL)

TSL:1

Version

ENST00000562189.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000562189.2 DDX11L16-244

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Transcript: ENST00000562189.2 DDX11L16-244

Summary

About Us

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