Transcript: ENST00000606648.2 LINC03003-207

Description

long intergenic non-protein coding RNA 3003 [Source:HGNC Symbol;Acc:HGNC:56126]

Location

Chromosome 6: 29,223,857-29,290,447 forward strand.

About this transcript

This transcript has 2 exons and maps to 233 oligo probes.

Gene

This transcript is a product of gene ENSG00000290496.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000733084.1	LINC03003-211	544	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000641112.1	LINC03003-208	3080	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000641875.1	LINC03003-210	3017	No protein	-	lncRNA	-	-
ENST00000641299.1	LINC03003-209	2975	No protein	-	lncRNA	-	-
ENST00000733093.1	LINC03003-215	1402	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733096.1	LINC03003-217	804	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733110.1	LINC03003-224	719	No protein	-	lncRNA	-	-
ENST00000733102.1	LINC03003-220	706	No protein	-	lncRNA	-	-
ENST00000733098.1	LINC03003-218	700	No protein	-	lncRNA	-	-
ENST00000733089.1	LINC03003-213	693	No protein	-	lncRNA	-	-
ENST00000733091.1	LINC03003-214	689	No protein	-	lncRNA	-	-
ENST00000733106.1	LINC03003-222	626	No protein	-	lncRNA	-	-
ENST00000441381.2	LINC03003-206	580	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000733100.1	LINC03003-219	572	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733114.1	LINC03003-227	520	No protein	-	lncRNA	-	-
ENST00000606648.2	LINC03003-207	517	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000733094.1	LINC03003-216	463	No protein	-	lncRNA	-	-
ENST00000733113.1	LINC03003-226	456	No protein	-	lncRNA	-	-
ENST00000733112.1	LINC03003-225	450	No protein	-	lncRNA	-	-
ENST00000733087.1	LINC03003-212	446	No protein	-	lncRNA	-	-
ENST00000733108.1	LINC03003-223	356	No protein	-	lncRNA	-	-
ENST00000733104.1	LINC03003-221	335	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 517 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000606648.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Annotation Attributes

overlaps pseudogene [Definitions]

Transcript: ENST00000606648.2 LINC03003-207

Summary

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Transcript: ENST00000606648.2 LINC03003-207

Summary

About Us

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