Transcript: ENST00000646538.2 SOX7-202

Description

SRY-box transcription factor 7 [Source:HGNC Symbol;Acc:HGNC:18196]

Location

About this transcript

This transcript has 2 exons, is annotated with 16 domains and features, is associated with 4267 variant alleles and maps to 346 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	CCDS	UniProt Match	RefSeq Match	Flags
ENST00000646538.2	SOX7-202	3215	388aa	ENSP00000495029.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding		Q9BT81-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 3,215 bps, Translation length: 388 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q9BT81

Version

ENST00000646538.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.