Transcript: ENST00000639377.1 DUS4L-216

Description

dihydrouridine synthase 4 like [Source:HGNC Symbol;Acc:HGNC:21517]

Gene Synonyms

DUS4, PP35

Location

Scaffold HG2266_PATCH: 409,613-423,670 forward strand.

About this transcript

This transcript has 7 exons, is annotated with 1 domain and feature and maps to 512 oligo probes.

Gene

This transcript is a product of gene ENSG00000284103.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000639937.2	DUS4L-220	2266	317aa	ENSP00000491438.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O95620-1	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000638229.1	DUS4L-212	2280	90aa	ENSP00000491182.1	Nonsense mediated decay	F2Z2E4	-	-
ENST00000639339.1	DUS4L-215	1676	119aa	ENSP00000492827.1	Nonsense mediated decay	F8WEL2	-	-
ENST00000639377.1	DUS4L-216	1610	90aa	ENSP00000492533.1	Nonsense mediated decay	F2Z2E4	-	-
ENST00000638308.1	DUS4L-213	1375	90aa	ENSP00000491987.1	Nonsense mediated decay	F2Z2E4	-	-
ENST00000640935.1	DUS4L-222	857	48aa	ENSP00000491292.1	Nonsense mediated decay	F8WFE3	-	-
ENST00000639779.1	DUS4L-219	491	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000639991.1	DUS4L-221	2148	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000639466.1	DUS4L-217	989	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000639586.1	DUS4L-218	744	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000638345.1	DUS4L-214	583	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 7, Coding exons: 3, Transcript length: 1,610 bps, Translation length: 90 residues

Version

ENST00000639377.1

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

Transcript: ENST00000639377.1 DUS4L-216

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Transcript: ENST00000639377.1 DUS4L-216

Summary

About Us

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