Transcript: ENST00000636590.2 FRG1-220

Description

FSHD region gene 1 [Source:HGNC Symbol;Acc:HGNC:3954]

Gene Synonyms

FRG1A, FSG1

Location

Scaffold HG2023_PATCH: 33,802-56,122 forward strand.

About this transcript

This transcript has 9 exons, is annotated with 9 domains and features, is associated with 11429 variant alleles and maps to 367 oligo probes.

Gene

This transcript is a product of gene ENSG00000283153.2 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000636590.2	FRG1-220	978	258aa	ENSP00000490541.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q14331	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000637139.1	FRG1-222	755	102aa	ENSP00000489664.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PLY7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000636262.1	FRG1-218	738	116aa	ENSP00000490915.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9PRR7	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENST00000637604.1	FRG1-223	714	42aa	ENSP00000489960.1	Nonsense mediated decay	E9PI42	-	-
ENST00000636832.1	FRG1-221	421	84aa	ENSP00000489984.1	Nonsense mediated decay	J3KSQ7	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENST00000636156.1	FRG1-217	838	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000636338.1	FRG1-219	340	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-

Summary

Statistics

Exons: 9, Coding exons: 9, Transcript length: 978 bps, Translation length: 258 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q14331

Version

ENST00000636590.2

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

GENCODE primary gene

This transcript is a member of the Gencode Primary gene set.

Transcript: ENST00000636590.2 FRG1-220

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000636590.2 FRG1-220

Summary

About Us

Get help

Our sister sites

Follow us