Transcript: ENST00000627929.1 PADI1-205

Description

peptidyl arginine deiminase 1 [Source:HGNC Symbol;Acc:HGNC:18367]

Gene Synonyms

HPAD10, PAD1, PDI, PDI1

Location

Scaffold HG2095_PATCH: 66,001-68,672 forward strand.

About this transcript

This transcript has 4 exons and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSG00000281459.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	RefSeq Match	Flags
ENST00000631074.2	PADI1-207	3846	663aa	ENSP00000485803.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q9ULC6	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000627929.1	PADI1-205	513	No protein	-	Alternatively spliced transcript of a protein coding gene for which we cannot define a CDS.Protein coding CDS not defined	-	-	-
ENST00000629222.1	PADI1-206	3124	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-
ENST00000650078.1	PADI1-208	2237	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-	-

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 513 bps,

Version

ENST00000627929.1

Type

Protein coding CDS not defined

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project, projected to the alternate locus via a mapping from the primary assembly.

Transcript: ENST00000627929.1 PADI1-205

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Transcript: ENST00000627929.1 PADI1-205

Summary

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