Transcript: ENST00000675671.1 DGCR5-209

Description

DiGeorge syndrome critical region gene 5 [Source:HGNC Symbol;Acc:HGNC:16757]

Gene Synonyms

DGCR10, DGCR9, DGS-A, DGS-B, LINC00037, NCRNA00037, POM121L5P, RIP, X91348

Location

Chromosome 22: 18,970,484-19,020,665 forward strand.

About this transcript

This transcript has 7 exons and maps to 698 oligo probes.

Gene

This transcript is a product of gene ENSG00000273032.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000440005.6	DGCR5-204	1299	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000438934.5	DGCR5-203	5492	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000675214.1	DGCR5-208	5074	No protein	-	lncRNA	-	-
ENST00000675671.1	DGCR5-209	4432	No protein	-	lncRNA	-	-
ENST00000675978.1	DGCR5-210	3828	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000674913.1	DGCR5-207	3823	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000609630.2	DGCR5-205	3724	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000421572.2	DGCR5-201	3581	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000783668.1	DGCR5-245	2557	No protein	-	lncRNA	-	-
ENST00000783669.1	DGCR5-246	2030	No protein	-	lncRNA	-	-
ENST00000783639.1	DGCR5-216	1312	No protein	-	lncRNA	-	-
ENST00000783646.1	DGCR5-223	1201	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000783637.1	DGCR5-214	1136	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000783681.1	DGCR5-258	1121	No protein	-	lncRNA	-	-
ENST00000783644.1	DGCR5-221	1102	No protein	-	lncRNA	-	-
ENST00000783682.1	DGCR5-259	1101	No protein	-	lncRNA	-	-
ENST00000783640.1	DGCR5-217	1060	No protein	-	lncRNA	-	-
ENST00000783657.1	DGCR5-234	1038	No protein	-	lncRNA	-	-
ENST00000783650.1	DGCR5-227	1027	No protein	-	lncRNA	-	-
ENST00000609839.2	DGCR5-206	1006	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000783660.1	DGCR5-237	1003	No protein	-	lncRNA	-	-
ENST00000783638.1	DGCR5-215	1001	No protein	-	lncRNA	-	-
ENST00000783643.1	DGCR5-220	998	No protein	-	lncRNA	-	-
ENST00000783649.1	DGCR5-226	997	No protein	-	lncRNA	-	-
ENST00000783634.1	DGCR5-211	986	No protein	-	lncRNA	-	-
ENST00000783635.1	DGCR5-212	967	No protein	-	lncRNA	-	-
ENST00000783652.1	DGCR5-229	958	No protein	-	lncRNA	-	-
ENST00000783654.1	DGCR5-231	947	No protein	-	lncRNA	-	-
ENST00000783683.1	DGCR5-260	947	No protein	-	lncRNA	-	-
ENST00000783659.1	DGCR5-236	926	No protein	-	lncRNA	-	-
ENST00000783665.1	DGCR5-242	904	No protein	-	lncRNA	-	-
ENST00000783641.1	DGCR5-218	877	No protein	-	lncRNA	-	-
ENST00000783653.1	DGCR5-230	873	No protein	-	lncRNA	-	-
ENST00000783642.1	DGCR5-219	868	No protein	-	lncRNA	-	-
ENST00000783663.1	DGCR5-240	849	No protein	-	lncRNA	-	-
ENST00000424407.2	DGCR5-202	822	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000783636.1	DGCR5-213	809	No protein	-	lncRNA	-	-
ENST00000783662.1	DGCR5-239	803	No protein	-	lncRNA	-	-
ENST00000783655.1	DGCR5-232	801	No protein	-	lncRNA	-	-
ENST00000783656.1	DGCR5-233	792	No protein	-	lncRNA	-	-
ENST00000783651.1	DGCR5-228	767	No protein	-	lncRNA	-	-
ENST00000783664.1	DGCR5-241	765	No protein	-	lncRNA	-	-
ENST00000783689.1	DGCR5-266	744	No protein	-	lncRNA	-	-
ENST00000783645.1	DGCR5-222	740	No protein	-	lncRNA	-	-
ENST00000783658.1	DGCR5-235	730	No protein	-	lncRNA	-	-
ENST00000783679.1	DGCR5-256	725	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000783647.1	DGCR5-224	695	No protein	-	lncRNA	-	-
ENST00000783666.1	DGCR5-243	693	No protein	-	lncRNA	-	-
ENST00000783670.1	DGCR5-247	685	No protein	-	lncRNA	-	-
ENST00000783661.1	DGCR5-238	666	No protein	-	lncRNA	-	-
ENST00000783667.1	DGCR5-244	621	No protein	-	lncRNA	-	-
ENST00000783673.1	DGCR5-250	602	No protein	-	lncRNA	-	-
ENST00000783685.1	DGCR5-262	578	No protein	-	lncRNA	-	-
ENST00000783676.1	DGCR5-253	577	No protein	-	lncRNA	-	-
ENST00000783680.1	DGCR5-257	563	No protein	-	lncRNA	-	-
ENST00000783686.1	DGCR5-263	563	No protein	-	lncRNA	-	-
ENST00000783684.1	DGCR5-261	559	No protein	-	lncRNA	-	-
ENST00000783687.1	DGCR5-264	523	No protein	-	lncRNA	-	-
ENST00000783688.1	DGCR5-265	497	No protein	-	lncRNA	-	-
ENST00000783671.1	DGCR5-248	490	No protein	-	lncRNA	-	-
ENST00000783648.1	DGCR5-225	477	No protein	-	lncRNA	-	-
ENST00000783691.1	DGCR5-268	476	No protein	-	lncRNA	-	-
ENST00000783675.1	DGCR5-252	437	No protein	-	lncRNA	-	-
ENST00000783677.1	DGCR5-254	436	No protein	-	lncRNA	-	-
ENST00000783678.1	DGCR5-255	418	No protein	-	lncRNA	-	-
ENST00000783672.1	DGCR5-249	381	No protein	-	lncRNA	-	-
ENST00000783674.1	DGCR5-251	378	No protein	-	lncRNA	-	-
ENST00000783690.1	DGCR5-267	318	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 4,432 bps,

Version

ENST00000675671.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000675671.1 DGCR5-209

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENST00000675671.1 DGCR5-209

Summary

About Us

Get help

Our sister sites

Follow us