Transcript: ENST00000654818.1 LINC01836-203

Description

long intergenic non-protein coding RNA 1836 [Source:HGNC Symbol;Acc:HGNC:52652]

Location

Chromosome 19: 782,755-785,920 forward strand.

About this transcript

This transcript has 3 exons and maps to 87 oligo probes.

Gene

This transcript is a product of gene ENSG00000267530.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000719201.1	LINC01836-207	715	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000606242.4	LINC01836-202	1368	No protein	-	lncRNA	-	TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000654818.1	LINC01836-203	1296	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000719204.1	LINC01836-210	1247	No protein	-	lncRNA	-	-
ENST00000662249.2	LINC01836-204	1069	No protein	-	lncRNA	-	-
ENST00000719205.1	LINC01836-211	1034	No protein	-	lncRNA	-	-
ENST00000719203.1	LINC01836-209	1030	No protein	-	lncRNA	-	-
ENST00000719206.1	LINC01836-212	1002	No protein	-	lncRNA	-	-
ENST00000665908.2	LINC01836-205	917	No protein	-	lncRNA	-	-
ENST00000586061.1	LINC01836-201	829	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000719202.1	LINC01836-208	817	No protein	-	lncRNA	-	-
ENST00000686865.2	LINC01836-206	733	No protein	-	lncRNA	-	-
ENST00000719207.1	LINC01836-213	701	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 3, Coding exons: 0, Transcript length: 1,296 bps,

Version

ENST00000654818.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

GENCODE basic gene

This transcript is a member of the Gencode basic gene set.

Transcript: ENST00000654818.1 LINC01836-203

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Transcript: ENST00000654818.1 LINC01836-203

Summary

About Us

Get help

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