Transcript: ENST00000658101.1 LINC02175-209

Description

long intergenic non-protein coding RNA 2175 [Source:HGNC Symbol;Acc:HGNC:27550]

Location

Chromosome 16: 25,067,031-25,069,413 forward strand.

About this transcript

This transcript has 2 exons and maps to 261 oligo probes.

Gene

This transcript is a product of gene ENSG00000262155.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000668238.1	LINC02175-215	1080	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000667339.1	LINC02175-214	2335	No protein	-	lncRNA	-	-
ENST00000654253.2	LINC02175-203	2301	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000658101.1	LINC02175-209	2251	No protein	-	lncRNA	-	-
ENST00000571219.2	LINC02175-201	1898	No protein	-	lncRNA	-	TSL 1: A transcript where all splice junctions are supported by at least one non-suspect mRNA. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:1,
ENST00000655561.2	LINC02175-205	1821	No protein	-	lncRNA	-	-
ENST00000771042.1	LINC02175-225	1377	No protein	-	lncRNA	-	-
ENST00000653156.1	LINC02175-202	1167	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000654349.1	LINC02175-204	1134	No protein	-	lncRNA	-	-
ENST00000665669.2	LINC02175-212	1115	No protein	-	lncRNA	-	-
ENST00000658831.1	LINC02175-210	1114	No protein	-	lncRNA	-	-
ENST00000657697.1	LINC02175-208	1106	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000657680.1	LINC02175-207	1091	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000771041.1	LINC02175-224	1079	No protein	-	lncRNA	-	-
ENST00000771038.1	LINC02175-221	1069	No protein	-	lncRNA	-	-
ENST00000657497.2	LINC02175-206	1033	No protein	-	lncRNA	-	-
ENST00000771040.1	LINC02175-223	1002	No protein	-	lncRNA	-	-
ENST00000666471.1	LINC02175-213	996	No protein	-	lncRNA	-	-
ENST00000771037.1	LINC02175-220	992	No protein	-	lncRNA	-	-
ENST00000670692.1	LINC02175-216	988	No protein	-	lncRNA	-	-
ENST00000771039.1	LINC02175-222	954	No protein	-	lncRNA	-	-
ENST00000660807.1	LINC02175-211	852	No protein	-	lncRNA	-	-
ENST00000771034.1	LINC02175-217	835	No protein	-	lncRNA	-	-
ENST00000771035.1	LINC02175-218	818	No protein	-	lncRNA	-	-
ENST00000771036.1	LINC02175-219	624	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000771043.1	LINC02175-226	508	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 2,251 bps,

Version

ENST00000658101.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000658101.1 LINC02175-209

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Transcript: ENST00000658101.1 LINC02175-209

Summary

About Us

Get help

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