Transcript: ENST00000563722.2 LINC01882-201

Description

long intergenic non-protein coding RNA 1882 [Source:HGNC Symbol;Acc:HGNC:52701]

Location

Chromosome 18: 12,774,650-12,776,137 reverse strand.

About this transcript

This transcript has 1 exon and maps to 38 oligo probes.

Gene

This transcript is a product of gene ENSG00000260302.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000589930.4	LINC01882-202	1336	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000733313.1	LINC01882-221	2943	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733312.1	LINC01882-220	1833	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000563722.2	LINC01882-201	1488	No protein	-	lncRNA	-	TSL NA: A transcript that was not analysed for TSL. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:NA,
ENST00000733304.1	LINC01882-212	1417	No protein	-	lncRNA	-	-
ENST00000733309.1	LINC01882-217	1318	No protein	-	lncRNA	-	-
ENST00000733305.1	LINC01882-213	1299	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733300.1	LINC01882-208	1245	No protein	-	lncRNA	-	-
ENST00000733306.1	LINC01882-214	1211	No protein	-	lncRNA	-	-
ENST00000733302.1	LINC01882-210	1207	No protein	-	lncRNA	-	-
ENST00000652793.2	LINC01882-203	1156	No protein	-	lncRNA	-	-
ENST00000733298.1	LINC01882-206	1142	No protein	-	lncRNA	-	-
ENST00000657716.2	LINC01882-204	1089	No protein	-	lncRNA	-	-
ENST00000733303.1	LINC01882-211	1078	No protein	-	lncRNA	-	-
ENST00000733310.1	LINC01882-218	1039	No protein	-	lncRNA	-	-
ENST00000733297.1	LINC01882-205	1029	No protein	-	lncRNA	-	-
ENST00000733307.1	LINC01882-215	1005	No protein	-	lncRNA	-	-
ENST00000733308.1	LINC01882-216	967	No protein	-	lncRNA	-	-
ENST00000733301.1	LINC01882-209	910	No protein	-	lncRNA	-	-
ENST00000733299.1	LINC01882-207	907	No protein	-	lncRNA	-	-
ENST00000733314.1	LINC01882-222	897	No protein	-	lncRNA	-	-
ENST00000733311.1	LINC01882-219	860	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 1, Coding exons: 0, Transcript length: 1,488 bps,

Transcript Support Level (TSL)

TSL:NA

Version

ENST00000563722.2

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000563722.2 LINC01882-201

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Transcript: ENST00000563722.2 LINC01882-201

Summary

About Us

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