Transcript: ENST00000653984.1 LINC02253-203

Description

long intergenic non-protein coding RNA 2253 [Source:HGNC Symbol;Acc:HGNC:53151]

Location

Chromosome 15: 97,234,246-97,432,086 forward strand.

About this transcript

This transcript has 7 exons and maps to 114 oligo probes.

Gene

This transcript is a product of gene ENSG00000259485.3 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000740177.1	LINC02253-211	1470	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740199.1	LINC02253-233	1414	No protein	-	lncRNA	-	-
ENST00000740178.1	LINC02253-212	1348	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740192.1	LINC02253-226	1346	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000664769.2	LINC02253-208	1308	No protein	-	lncRNA	-	-
ENST00000660428.2	LINC02253-207	1293	No protein	-	lncRNA	-	-
ENST00000740196.1	LINC02253-230	1178	No protein	-	lncRNA	-	-
ENST00000656523.2	LINC02253-205	1168	No protein	-	lncRNA	-	-
ENST00000560314.2	LINC02253-202	1151	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 5: A transcript where no single transcript supports the model structure. The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:5,
ENST00000740208.1	LINC02253-242	1150	No protein	-	lncRNA	-	-
ENST00000740216.1	LINC02253-250	1089	No protein	-	lncRNA	-	-
ENST00000655490.2	LINC02253-204	1074	No protein	-	lncRNA	-	-
ENST00000740179.1	LINC02253-213	1069	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000653984.1	LINC02253-203	1061	No protein	-	lncRNA	-	-
ENST00000740200.1	LINC02253-234	1053	No protein	-	lncRNA	-	-
ENST00000740203.1	LINC02253-237	1042	No protein	-	lncRNA	-	-
ENST00000740206.1	LINC02253-240	1035	No protein	-	lncRNA	-	-
ENST00000740193.1	LINC02253-227	1016	No protein	-	lncRNA	-	-
ENST00000666169.1	LINC02253-209	996	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740188.1	LINC02253-222	984	No protein	-	lncRNA	-	-
ENST00000740180.1	LINC02253-214	978	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740189.1	LINC02253-223	970	No protein	-	lncRNA	-	-
ENST00000740218.1	LINC02253-252	962	No protein	-	lncRNA	-	-
ENST00000740185.1	LINC02253-219	947	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000669885.1	LINC02253-210	946	No protein	-	lncRNA	-	-
ENST00000659377.2	LINC02253-206	933	No protein	-	lncRNA	-	-
ENST00000740201.1	LINC02253-235	898	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740215.1	LINC02253-249	860	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740182.1	LINC02253-216	850	No protein	-	lncRNA	-	-
ENST00000740183.1	LINC02253-217	838	No protein	-	lncRNA	-	-
ENST00000740190.1	LINC02253-224	831	No protein	-	lncRNA	-	-
ENST00000740204.1	LINC02253-238	812	No protein	-	lncRNA	-	-
ENST00000740195.1	LINC02253-229	811	No protein	-	lncRNA	-	-
ENST00000740221.1	LINC02253-255	810	No protein	-	lncRNA	-	-
ENST00000740191.1	LINC02253-225	794	No protein	-	lncRNA	-	-
ENST00000740211.1	LINC02253-245	779	No protein	-	lncRNA	-	-
ENST00000740186.1	LINC02253-220	771	No protein	-	lncRNA	-	-
ENST00000740197.1	LINC02253-231	755	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740181.1	LINC02253-215	754	No protein	-	lncRNA	-	-
ENST00000559321.2	LINC02253-201	753	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000740184.1	LINC02253-218	744	No protein	-	lncRNA	-	-
ENST00000740207.1	LINC02253-241	724	No protein	-	lncRNA	-	-
ENST00000740187.1	LINC02253-221	718	No protein	-	lncRNA	-	-
ENST00000740202.1	LINC02253-236	716	No protein	-	lncRNA	-	-
ENST00000740198.1	LINC02253-232	705	No protein	-	lncRNA	-	-
ENST00000740217.1	LINC02253-251	690	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000740209.1	LINC02253-243	667	No protein	-	lncRNA	-	-
ENST00000740205.1	LINC02253-239	634	No protein	-	lncRNA	-	-
ENST00000740213.1	LINC02253-247	605	No protein	-	lncRNA	-	-
ENST00000740214.1	LINC02253-248	584	No protein	-	lncRNA	-	-
ENST00000740210.1	LINC02253-244	511	No protein	-	lncRNA	-	-
ENST00000740194.1	LINC02253-228	488	No protein	-	lncRNA	-	-
ENST00000740212.1	LINC02253-246	485	No protein	-	lncRNA	-	-
ENST00000740219.1	LINC02253-253	459	No protein	-	lncRNA	-	-
ENST00000740220.1	LINC02253-254	432	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 7, Coding exons: 0, Transcript length: 1,061 bps,

Version

ENST00000653984.1

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000653984.1 LINC02253-203

Summary

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Transcript: ENST00000653984.1 LINC02253-203

Summary

About Us

Get help

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