Transcript: ENST00000557544.3

Description

HIF1A antisense RNA 3

Location

Chromosome 14: 61,680,710-61,696,251 reverse strand.

About this transcript

This transcript has 2 exons and maps to 85 oligo probes.

Gene

This transcript is a product of gene ENSG00000258667.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000733788.1	-	1076	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary,
ENST00000733793.1	-	2371	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000698327.2	-	2321	No protein	-	lncRNA	-	-
ENST00000698331.1	-	2013	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733789.1	-	1821	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000660325.2	-	1783	No protein	-	lncRNA	-	-
ENST00000733791.1	-	1767	No protein	-	lncRNA	-	-
ENST00000698332.1	-	1720	No protein	-	lncRNA	-	-
ENST00000733798.1	-	1620	No protein	-	lncRNA	-	-
ENST00000733790.1	-	1460	No protein	-	lncRNA	-	-
ENST00000557544.3	-	1411	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000733797.1	-	1327	No protein	-	lncRNA	-	-
ENST00000733799.1	-	1315	No protein	-	lncRNA	-	-
ENST00000698324.1	-	1309	No protein	-	lncRNA	-	-
ENST00000733796.1	-	1022	No protein	-	lncRNA	-	-
ENST00000715697.1	-	941	No protein	-	lncRNA	-	-
ENST00000733795.1	-	822	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000733794.1	-	796	No protein	-	lncRNA	-	-
ENST00000733792.1	-	775	No protein	-	lncRNA	-	-
ENST00000554254.3	-	625	No protein	-	lncRNA	-	TSL 3: A transcript where the only support is from a single EST The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:3,
ENST00000698335.1	-	517	No protein	-	lncRNA	-	-
ENST00000698334.1	-	508	No protein	-	lncRNA	-	-
ENST00000698325.1	-	503	No protein	-	lncRNA	-	-
ENST00000698326.1	-	336	No protein	-	lncRNA	-	-
ENST00000698333.1	-	273	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 2, Coding exons: 0, Transcript length: 1,411 bps,

Transcript Support Level (TSL)

TSL:3

Version

ENST00000557544.3

Type

LncRNA

Annotation Method

Transcript which was created by the HAVANA-Ensembl manually supervised computational pipeline (TAGENE) for long-read sequence data.

Transcript: ENST00000557544.3

Summary

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Transcript: ENST00000557544.3

Summary

About Us

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