Transcript: ENST00000550216.1 PRANCR-203

Description

progenitor renewal associated non-coding RNA [Source:HGNC Symbol;Acc:HGNC:51126]

Gene Synonyms

CNOT2-DT, LINC01481

Location

Chromosome 12: 70,224,993-70,243,349 reverse strand.

About this transcript

This transcript has 5 exons and maps to 163 oligo probes.

Gene

This transcript is a product of gene ENSG00000257815.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000549419.6	PRANCR-201	2654	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000656495.4	PRANCR-206	5417	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000668518.1	PRANCR-207	2690	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000553135.4	PRANCR-205	2120	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000807829.1	PRANCR-249	1810	No protein	-	lncRNA	-	-
ENST00000675475.1	PRANCR-209	1711	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000688862.3	PRANCR-213	1560	No protein	-	lncRNA	-	-
ENST00000807803.1	PRANCR-223	1444	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807799.1	PRANCR-219	1326	No protein	-	lncRNA	-	-
ENST00000552998.2	PRANCR-204	1279	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000807809.1	PRANCR-229	1254	No protein	-	lncRNA	-	-
ENST00000807813.1	PRANCR-233	1104	No protein	-	lncRNA	-	-
ENST00000807808.1	PRANCR-228	1062	No protein	-	lncRNA	-	-
ENST00000807811.1	PRANCR-231	1060	No protein	-	lncRNA	-	-
ENST00000807832.1	PRANCR-252	1045	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807817.1	PRANCR-237	1042	No protein	-	lncRNA	-	-
ENST00000701960.2	PRANCR-216	1031	No protein	-	lncRNA	-	-
ENST00000807835.1	PRANCR-255	1007	No protein	-	lncRNA	-	-
ENST00000686629.2	PRANCR-212	974	No protein	-	lncRNA	-	-
ENST00000807844.1	PRANCR-264	926	No protein	-	lncRNA	-	-
ENST00000686072.2	PRANCR-211	919	No protein	-	lncRNA	-	-
ENST00000807797.1	PRANCR-217	915	No protein	-	lncRNA	-	-
ENST00000807831.1	PRANCR-251	912	No protein	-	lncRNA	-	-
ENST00000807816.1	PRANCR-236	910	No protein	-	lncRNA	-	-
ENST00000807836.1	PRANCR-256	895	No protein	-	lncRNA	-	-
ENST00000807814.1	PRANCR-234	886	No protein	-	lncRNA	-	-
ENST00000549651.1	PRANCR-202	883	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000807812.1	PRANCR-232	882	No protein	-	lncRNA	-	-
ENST00000807804.1	PRANCR-224	877	No protein	-	lncRNA	-	-
ENST00000807807.1	PRANCR-227	868	No protein	-	lncRNA	-	-
ENST00000807815.1	PRANCR-235	867	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807806.1	PRANCR-226	866	No protein	-	lncRNA	-	-
ENST00000670041.1	PRANCR-208	864	No protein	-	lncRNA	-	-
ENST00000676451.1	PRANCR-210	857	No protein	-	lncRNA	-	-
ENST00000807830.1	PRANCR-250	854	No protein	-	lncRNA	-	-
ENST00000807801.1	PRANCR-221	840	No protein	-	lncRNA	-	-
ENST00000807840.1	PRANCR-260	808	No protein	-	lncRNA	-	-
ENST00000807810.1	PRANCR-230	787	No protein	-	lncRNA	-	-
ENST00000807846.1	PRANCR-266	787	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807825.1	PRANCR-245	746	No protein	-	lncRNA	-	-
ENST00000807843.1	PRANCR-263	731	No protein	-	lncRNA	-	-
ENST00000807800.1	PRANCR-220	706	No protein	-	lncRNA	-	-
ENST00000807841.1	PRANCR-261	702	No protein	-	lncRNA	-	-
ENST00000807845.1	PRANCR-265	700	No protein	-	lncRNA	-	-
ENST00000807837.1	PRANCR-257	699	No protein	-	lncRNA	-	-
ENST00000701750.2	PRANCR-215	679	No protein	-	lncRNA	-	-
ENST00000807850.1	PRANCR-270	676	No protein	-	lncRNA	-	-
ENST00000689831.2	PRANCR-214	657	No protein	-	lncRNA	-	-
ENST00000807802.1	PRANCR-222	653	No protein	-	lncRNA	-	-
ENST00000807842.1	PRANCR-262	641	No protein	-	lncRNA	-	-
ENST00000807821.1	PRANCR-241	640	No protein	-	lncRNA	-	-
ENST00000807828.1	PRANCR-248	628	No protein	-	lncRNA	-	-
ENST00000807805.1	PRANCR-225	604	No protein	-	lncRNA	-	-
ENST00000807826.1	PRANCR-246	593	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000807823.1	PRANCR-243	590	No protein	-	lncRNA	-	-
ENST00000807849.1	PRANCR-269	558	No protein	-	lncRNA	-	-
ENST00000807827.1	PRANCR-247	538	No protein	-	lncRNA	-	-
ENST00000807838.1	PRANCR-258	532	No protein	-	lncRNA	-	-
ENST00000807818.1	PRANCR-238	522	No protein	-	lncRNA	-	-
ENST00000550216.1	PRANCR-203	494	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000807839.1	PRANCR-259	488	No protein	-	lncRNA	-	-
ENST00000807824.1	PRANCR-244	473	No protein	-	lncRNA	-	-
ENST00000807822.1	PRANCR-242	466	No protein	-	lncRNA	-	-
ENST00000807848.1	PRANCR-268	426	No protein	-	lncRNA	-	-
ENST00000807819.1	PRANCR-239	339	No protein	-	lncRNA	-	-
ENST00000807834.1	PRANCR-254	335	No protein	-	lncRNA	-	-
ENST00000807820.1	PRANCR-240	310	No protein	-	lncRNA	-	-
ENST00000807833.1	PRANCR-253	308	No protein	-	lncRNA	-	-
ENST00000807847.1	PRANCR-267	284	No protein	-	lncRNA	-	-
ENST00000807798.1	PRANCR-218	235	No protein	-	lncRNA	-	-

Summary

Statistics

Exons: 5, Coding exons: 0, Transcript length: 494 bps,

Transcript Support Level (TSL)

TSL:2

Version

ENST00000550216.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000550216.1 PRANCR-203

Summary

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Transcript: ENST00000550216.1 PRANCR-203

Summary

About Us

Get help

Our sister sites

Follow us