Transcript: ENST00000662561.1 LINC02450-208

Description

long intergenic non-protein coding RNA 2450 [Source:HGNC Symbol;Acc:HGNC:53382]

Location

Chromosome 12: 42,692,206-42,717,120 forward strand.

About this transcript

This transcript has 4 exons and maps to 202 oligo probes.

Gene

This transcript is a product of gene ENSG00000257114.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	RefSeq Match	Flags
ENST00000715727.1	LINC02450-210	1321	No protein	-	lncRNA	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, GENCODE Primary represents a minimal set that contains MANE Select, MANE Plus Clinical and Ensembl Canonical transcripts and transcripts containing any conserved exons and common alternative splicing events (including exons skips) that are absent from the MANE and Ensembl Canonical transcripts for protein-coding genes. Other biotypes will have the GENCODE Primary flag added to the Ensembl Canonical transcript and for lncRNA genes only this will be the transcripts with the longest genomic span.GENCODE Primary, A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000662561.1	LINC02450-208	1251	No protein	-	lncRNA	-	-
ENST00000761458.1	LINC02450-211	1217	No protein	-	lncRNA	-	-
ENST00000660010.1	LINC02450-206	1147	No protein	-	lncRNA	-	-
ENST00000761461.1	LINC02450-214	1124	No protein	-	lncRNA	-	-
ENST00000660815.1	LINC02450-207	1110	No protein	-	lncRNA	-	-
ENST00000667161.1	LINC02450-209	1092	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,
ENST00000761460.1	LINC02450-213	1010	No protein	-	lncRNA	-	-
ENST00000550177.2	LINC02450-203	1003	No protein	-	lncRNA	-	TSL 2: A transcript where the best supporting mRNA is flagged as suspect or the support is from multiple ESTs The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:2,
ENST00000655825.1	LINC02450-205	998	No protein	-	lncRNA	-	-
ENST00000761459.1	LINC02450-212	981	No protein	-	lncRNA	-	-
ENST00000655248.1	LINC02450-204	944	No protein	-	lncRNA	-	-
ENST00000761463.1	LINC02450-216	901	No protein	-	lncRNA	-	-
ENST00000761464.1	LINC02450-217	883	No protein	-	lncRNA	-	-
ENST00000761465.1	LINC02450-218	743	No protein	-	lncRNA	-	-
ENST00000548764.5	LINC02450-202	579	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic, TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000546982.1	LINC02450-201	565	No protein	-	lncRNA	-	TSL 4: A transcript where the best supporting EST is flagged as suspect The Transcript Support Level (TSL) is a method to highlight the well-supported and poorly-supported transcript models for users, based on the type and quality of the alignments used to annotate the transcript. TSL:4,
ENST00000761462.1	LINC02450-215	490	No protein	-	lncRNA	-	A subset of the GENCODE transcript set, containing only 5' and 3' complete transcripts at protein-coding genes.GENCODE Basic,

Summary

Statistics

Exons: 4, Coding exons: 0, Transcript length: 1,251 bps,

Version

ENST00000662561.1

Type

LncRNA

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENST00000662561.1 LINC02450-208

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Transcript: ENST00000662561.1 LINC02450-208

Summary

About Us

Get help

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